RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 POLR2MP0CAP2 368 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 CYP2C9P11712 490 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 GHRHRQ02643 423 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 ARHGAP1Q07960 439 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 COL9A3Q14050 684 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 FCHSD1Q86WN1 690 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 CTCFLQ8NI51 663 aaPredicted RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 MAP3K14Q99558 947 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 PDCD2LQ9BRP1 358 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 NOC4LQ9BVI4 516 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 IL23AQ9NPF7 189 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 DDX41Q9UJV9 622 aaKnown RBP13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 MRVI1Q9Y6F6 885 aa13.41□□□□□ -0.26
SOX2-OT-233ENST00000600778 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 SH2B2O14492 632 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 DDAH1O94760 285 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 FGBP02675 491 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 MMP3P08254 477 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 KIF5BP33176 963 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 PGM5Q15124 567 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 SCLYQ96I15 445 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 ZFP91Q96JP5 570 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 WNT8AQ9H1J5 351 aa13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 TTYH1Q9H313 450 aaPredicted RBP13.4□□□□□ -0.26
SOX2-OT-233ENST00000600778 KIAA1217Q5T5P2 1943 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 SORBS3O60504 671 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 RXRAP19793 462 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 CASTP20810 708 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 CCND2P30279 289 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 NFRKBQ6P4R8 1299 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 VSIG10LQ86VR7 867 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 RAB11FIP4Q86YS3 637 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 DHX37Q8IY37 1157 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 CMTR1Q8N1G2 835 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 IL31RAQ8NI17 732 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 RRP36Q96EU6 259 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 SPZ1Q9BXG8 430 aa13.39□□□□□ -0.27
SOX2-OT-233ENST00000600778 BAZ2BQ9UIF8 2168 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 CDH23Q9H251 3354 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 CDC45O75419 566 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 RGS20O76081 388 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 DNAJB2P25686 324 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 LIFRP42702 1097 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 GNAQP50148 359 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 LAMC2Q13753 1193 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 DGKDQ16760 1214 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 RASIP1Q5U651 963 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 OTOP2Q7RTS6 562 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 SRBD1Q8N5C6 995 aaKnown RBP13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 HERVK_113Q902F9 699 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
SOX2-OT-233ENST00000600778 A0A0C4DFX4 3053 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 CALM1P0DP23 149 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 CALM2P0DP24 149 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 CALM3P0DP25 149 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 PBX2P40425 430 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 RNF20Q5VTR2 975 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 KCNV1Q6PIU1 500 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 MYLIPQ8WY64 445 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 KAT2BQ92831 832 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 GPKOWQ92917 476 aaPredicted RBP eCLIP13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 EMID1Q96A84 441 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 NOD1Q9Y239 953 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 SCN10AQ9Y5Y9 1956 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
SOX2-OT-233ENST00000600778 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 GGPS1O95749 300 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 PSEN2P49810 448 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 SP2Q02086 613 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 PTGISQ16647 500 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 DEFB128Q7Z7B8 93 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 RETREG2Q8NC44 543 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 SMARCC2Q8TAQ2 1214 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 CUL5Q93034 780 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 TIFAQ96CG3 184 aa13.36□□□□□ -0.27
SOX2-OT-233ENST00000600778 VWCEQ96DN2 955 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms