RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 IFNKQ9P0W0 207 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 NFE2L3Q9Y4A8 694 aa17.03■□□□□ 0.32
HIF3A-218ENST00000600383 GLTPD2A6NH11 291 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 SERPINC1P01008 464 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
HIF3A-218ENST00000600383 COG2Q14746 738 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 KMT5BQ4FZB7 885 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 MOB2Q70IA6 237 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 MCF2L2Q86YR7 1114 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 LARP4BQ92615 738 aaKnown RBP17.02■□□□□ 0.32
HIF3A-218ENST00000600383 L3MBTL3Q96JM7 780 aaPredicted RBP17.02■□□□□ 0.32
HIF3A-218ENST00000600383 TRERF1Q96PN7 1200 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 MED15Q96RN5 788 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 GDAQ9Y2T3 454 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.32
HIF3A-218ENST00000600383 ERCC5P28715 1186 aaPredicted RBP17.02■□□□□ 0.31
HIF3A-218ENST00000600383 ASIC1P78348 528 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 ZNF658Q5TYW1 1059 aaPredicted RBP17.02■□□□□ 0.31
HIF3A-218ENST00000600383 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 KCNK18Q7Z418 384 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 ENOX1Q8TC92 643 aaKnown RBP17.02■□□□□ 0.31
HIF3A-218ENST00000600383 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 TRIM9Q9C026 710 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 XPO4Q9C0E2 1151 aaKnown RBP17.02■□□□□ 0.31
HIF3A-218ENST00000600383 MAGEF1Q9HAY2 307 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 RRAGDQ9NQL2 400 aaPredicted RBP17.02■□□□□ 0.31
HIF3A-218ENST00000600383 COL20A1Q9P218 1284 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 KIAA1024Q9UPX6 916 aa17.02■□□□□ 0.31
HIF3A-218ENST00000600383 TBX3O15119 743 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 MYL1P05976 194 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 NF2P35240 595 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
HIF3A-218ENST00000600383 HSD17B4P51659 736 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 FANCCQ00597 558 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 DYMQ7RTS9 669 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.01■□□□□ 0.31
HIF3A-218ENST00000600383 FAM20AQ96MK3 541 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 ELP3Q9H9T3 547 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 RIPK3Q9Y572 518 aa17.01■□□□□ 0.31
HIF3A-218ENST00000600383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
HIF3A-218ENST00000600383 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
HIF3A-218ENST00000600383 DSG3P32926 999 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 PLS1Q14651 629 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 NSMFQ6X4W1 530 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 CATSPERGQ6ZRH7 1159 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 CCDC186Q7Z3E2 898 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 TEX2Q8IWB9 1127 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 CDCA5Q96FF9 252 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 C12orf42Q96LP6 360 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
HIF3A-218ENST00000600383 CTNND2Q9UQB3 1225 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 KLRC4O43908 158 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 GRIN3BO60391 1043 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 RPS6P62753 249 aaKnown RBP17■□□□□ 0.31
HIF3A-218ENST00000600383 CEP55Q53EZ4 464 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 SNRNP48Q6IEG0 339 aaKnown RBP17■□□□□ 0.31
HIF3A-218ENST00000600383 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 RAD54LQ92698 747 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 CLMNQ96JQ2 1002 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 C7orf25Q9BPX7 421 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
HIF3A-218ENST00000600383 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 ZKSCAN5Q9Y2L8 839 aa17■□□□□ 0.31
HIF3A-218ENST00000600383 POTEB3A0JP26 581 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 POTECB2RU33 542 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 E9PMD0 336 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 FDX1P10109 184 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 PTGS1P23219 599 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 PRCPP42785 496 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 UBASH3AP57075 661 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 PDE4DQ08499 809 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 POTEBQ6S5H4 581 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 FILIP1Q7Z7B0 1213 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 NT5C3AQ9H0P0 336 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 MYMKA6NI61 221 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 MED24O75448 989 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 SPIRE1Q08AE8 756 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 TMEM119Q4V9L6 283 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 RNF207Q6ZRF8 634 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 SYTL5Q8TDW5 730 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 PURBQ96QR8 312 aaKnown RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 TAAR1Q96RJ0 339 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 TAF1DQ9H5J8 278 aaPredicted RBP16.99■□□□□ 0.31
HIF3A-218ENST00000600383 EXOC1Q9NV70 894 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 HOXC10Q9NYD6 342 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 SYNRGQ9UMZ2 1314 aa16.99■□□□□ 0.31
HIF3A-218ENST00000600383 KDM3AQ9Y4C1 1321 aa16.98■□□□□ 0.31
HIF3A-218ENST00000600383 CHMP2AO43633 222 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms