RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 RPTORQ8N122 1335 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 SNAI1O95863 264 aaPredicted RBP19.03■□□□□ 0.64
USHBP1-210ENST00000600286 SREBF1P36956 1147 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 USP11P51784 963 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 EEPD1Q7L9B9 569 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 RASGRP4Q8TDF6 673 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 CDHR1Q96JP9 859 aa19.03■□□□□ 0.64
USHBP1-210ENST00000600286 FRMPD4Q14CM0 1322 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 VPS37CA5D8V6 355 aaPredicted RBP19.02■□□□□ 0.64
USHBP1-210ENST00000600286 BTBD18B2RXH4 712 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 MSCO60682 206 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 IQSEC1Q6DN90 963 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 TBCKQ8TEA7 893 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 SCFD2Q8WU76 684 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 SHISA4Q96DD7 197 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 PGBD1Q96JS3 809 aa19.02■□□□□ 0.64
USHBP1-210ENST00000600286 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.63
USHBP1-210ENST00000600286 MAFGO15525 162 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 AKR1A1P14550 325 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 TTLL4Q14679 1199 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 PRAMEF19Q5SWL8 479 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 PRPF38BQ5VTL8 546 aaKnown RBP19.01■□□□□ 0.63
USHBP1-210ENST00000600286 SEPT14Q6ZU15 432 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 PIK3AP1Q6ZUJ8 805 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 TMEM106CQ9BVX2 250 aa19.01■□□□□ 0.63
USHBP1-210ENST00000600286 NOL7Q9UMY1 257 aaKnown RBP19.01■□□□□ 0.63
USHBP1-210ENST00000600286 ASTN1O14525 1302 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 M0R2N6 131 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 SEPT4O43236 478 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 CYP3A4P08684 503 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 TGFB3P10600 412 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 EN2P19622 333 aaPredicted RBP19■□□□□ 0.63
USHBP1-210ENST00000600286 SYT1P21579 422 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 TRIM32Q13049 653 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 NR5A1Q13285 461 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 NPY5RQ15761 445 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 MAP3K21Q5TCX8 1036 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 FBXO16Q8IX29 292 aaPredicted RBP19■□□□□ 0.63
USHBP1-210ENST00000600286 OXER1Q8TDS5 423 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 RNF208Q9H0X6 261 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 SPC25Q9HBM1 224 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 RTEL1Q9NZ71 1219 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 MRVI1Q9Y6F6 885 aa19■□□□□ 0.63
USHBP1-210ENST00000600286 STX6O43752 255 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 IGHA2P01877 340 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 CYBAP13498 195 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 TNFAIP2Q03169 654 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 INF2Q27J81 1249 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 CCDC144BQ3MJ40 725 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 CEP55Q53EZ4 464 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 NEK8Q86SG6 692 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 WDR11Q9BZH6 1224 aa18.99■□□□□ 0.63
USHBP1-210ENST00000600286 NKRFO15226 690 aaKnown RBP eCLIP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 FIBPO43427 364 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 MYCP01106 439 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 ZNF865P0CJ78 1059 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 TXNP10599 105 aaKnown RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 RARBP10826 455 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 CCL5P13501 91 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 GCFC2P16383 781 aaKnown RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 CAPN2P17655 700 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 U2AF2P26368 475 aaKnown RBP eCLIP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 LETM2Q2VYF4 491 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 NIPA1Q7RTP0 329 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 GIMAP8Q8ND71 665 aaPredicted RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 GPRASP2Q96D09 838 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 MXRA8Q9BRK3 442 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 AP5M1Q9H0R1 490 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 JADE2Q9NQC1 790 aa18.98■□□□□ 0.63
USHBP1-210ENST00000600286 RBM19Q9Y4C8 960 aaKnown RBP18.98■□□□□ 0.63
USHBP1-210ENST00000600286 RBM47A0AV96 593 aaKnown RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 MARCH6O60337 910 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 CCND3P30281 292 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 MRPS9P82933 396 aaKnown RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 SETQ01105 290 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 MTMR1Q13613 665 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 BRDTQ58F21 947 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 TAPT1Q6NXT6 567 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 BRAPQ7Z569 592 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 PLA2G4DQ86XP0 818 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 INPP4AQ96PE3 977 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 UNC93B1Q9H1C4 597 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 ZSCAN16Q9H4T2 348 aaPredicted RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 TSHZ2Q9NRE2 1034 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 DDX20Q9UHI6 824 aaKnown RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 TCEAL9Q9UHQ7 104 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 UBIAD1Q9Y5Z9 338 aa18.97■□□□□ 0.63
USHBP1-210ENST00000600286 DDX49Q9Y6V7 483 aaKnown RBP18.97■□□□□ 0.63
USHBP1-210ENST00000600286 ADAMTS3O15072 1205 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 CCNT1O60563 726 aaKnown RBP18.96■□□□□ 0.63
USHBP1-210ENST00000600286 CIITAP33076 1130 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 ADCYAP1R1P41586 468 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 TRAPPC10P48553 1259 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 NEDD9Q14511 834 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 MOXD1Q6UVY6 613 aa18.96■□□□□ 0.63
USHBP1-210ENST00000600286 TRPV1Q8NER1 839 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms