RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PDE4D	Q08499	809 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	AP3B2	Q13367	1082 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	PGM5	Q15124	567 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	JAKMIP3	Q5VZ66	844 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	FBXO16	Q8IX29	292 aa	Predicted RBP	25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	DIS3L2	Q8IYB7	885 aa	Known RBP	25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	RASGRP4	Q8TDF6	673 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	ANO3	Q9BYT9	981 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	ABHD16B	Q9H3Z7	469 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	ZHX1	Q9UKY1	873 aa	Predicted RBP	25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	MTMR6	Q9Y217	621 aa		25.08	■■□□□ 1.61
LTBP4-227	ENST00000600026	FOS	P01100	380 aa	Predicted RBP	25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	NR3C2	P08235	984 aa		25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	ZNF865	P0CJ78	1059 aa	Predicted RBP	25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	CCL5	P13501	91 aa		25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	ACVR2B	Q13705	512 aa		25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	EEPD1	Q7L9B9	569 aa		25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	HMX1	Q9NP08	348 aa	Predicted RBP	25.07	■■□□□ 1.6
LTBP4-227	ENST00000600026	ZSCAN22	P10073	491 aa	Predicted RBP	25.06	■■□□□ 1.6
LTBP4-227	ENST00000600026	MYCL	P12524	364 aa	Predicted RBP	25.06	■■□□□ 1.6
LTBP4-227	ENST00000600026	MCTP2	Q6DN12	878 aa		25.06	■■□□□ 1.6
LTBP4-227	ENST00000600026	EHMT1	Q9H9B1	1298 aa		25.06	■■□□□ 1.6
LTBP4-227	ENST00000600026	VTA1	Q9NP79	307 aa		25.06	■■□□□ 1.6
LTBP4-227	ENST00000600026	CCND2	P30279	289 aa		25.05	■■□□□ 1.6
LTBP4-227	ENST00000600026	STXBP2	Q15833	593 aa		25.05	■■□□□ 1.6
LTBP4-227	ENST00000600026	FOXP1	Q9H334	677 aa	Predicted RBP	25.05	■■□□□ 1.6
LTBP4-227	ENST00000600026	BTBD18	B2RXH4	712 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026		M0R2N6	131 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	BRD1	O95696	1058 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	CNGA1	P29973	690 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	PKP1	Q13835	747 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	RNF208	Q9H0X6	261 aa		25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	PAK6	Q9NQU5	681 aa	Predicted RBP	25.04	■■□□□ 1.6
LTBP4-227	ENST00000600026	FOXD4L5	Q5VV16	416 aa	Predicted RBP	25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	PCNX4	Q63HM2	1172 aa		25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	TAPT1	Q6NXT6	567 aa		25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	VSIG10L	Q86VR7	867 aa		25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	OXER1	Q8TDS5	423 aa		25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	ZFP91	Q96JP5	570 aa	Predicted RBP	25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	CENPF	P49454	3210 aa		25.03	■■□□□ 1.6
LTBP4-227	ENST00000600026	SEPT4	O43236	478 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	F13A1	P00488	732 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	U2AF2	P26368	475 aa	Known RBP eCLIP	25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	SREBF1	P36956	1147 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	MRPS9	P82933	396 aa	Known RBP	25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	KRT25	Q7Z3Z0	450 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	FERMT3	Q86UX7	667 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	PDGFC	Q9NRA1	345 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	PDE4DIP	Q5VU43	2346 aa		25.02	■■□□□ 1.6
LTBP4-227	ENST00000600026	CCDC194	A0A1B0GVG4	234 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	EIF3J	O75822	258 aa	Known RBP	25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	AKR1A1	P14550	325 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	NR5A1	Q13285	461 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	CCDC144B	Q3MJ40	725 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	BRAP	Q7Z569	592 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	NOSTRIN	Q8IVI9	506 aa		25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	DDX20	Q9UHI6	824 aa	Known RBP	25.01	■■□□□ 1.59
LTBP4-227	ENST00000600026	RBM47	A0AV96	593 aa	Known RBP	25	■■□□□ 1.59
LTBP4-227	ENST00000600026	KIF28P	B7ZC32	967 aa		25	■■□□□ 1.59
LTBP4-227	ENST00000600026	ADCYAP1R1	P41586	468 aa		25	■■□□□ 1.59
LTBP4-227	ENST00000600026	PRPF38B	Q5VTL8	546 aa	Known RBP	25	■■□□□ 1.59
LTBP4-227	ENST00000600026	XRRA1	Q6P2D8	792 aa		25	■■□□□ 1.59
LTBP4-227	ENST00000600026	FAM184B	Q9ULE4	1060 aa		25	■■□□□ 1.59
LTBP4-227	ENST00000600026	ZDHHC9	Q9Y397	364 aa		25	■■□□□ 1.59
LTBP4-227	ENST00000600026	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	ADCY6	O43306	1168 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	RGS20	O76081	388 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	ARHGAP4	P98171	946 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	REST	Q13127	1097 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	ANO1	Q5XXA6	986 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	SEPT14	Q6ZU15	432 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	CRYGN	Q8WXF5	182 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	TNFRSF25	Q93038	417 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	LENG1	Q96BZ8	264 aa	Predicted RBP	24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	DEFB118	Q96PH6	123 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	RTEL1	Q9NZ71	1219 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	MYH15	Q9Y2K3	1946 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	ATP6V1D	Q9Y5K8	247 aa		24.99	■■□□□ 1.59
LTBP4-227	ENST00000600026	MSC	O60682	206 aa		24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	STAM2	O75886	525 aa		24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	GJB1	P08034	283 aa		24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	NONO	Q15233	471 aa	Known RBP eCLIP	24.98	■■□□□ 1.59	8e-7	■■■□□ 17.3
LTBP4-227	ENST00000600026	INPP4A	Q96PE3	977 aa	Predicted RBP	24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	TMEM106C	Q9BVX2	250 aa		24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	DOCK5	Q9H7D0	1870 aa		24.98	■■□□□ 1.59
LTBP4-227	ENST00000600026	TMEM63B	Q5T3F8	832 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	LHX8	Q68G74	356 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	PIK3AP1	Q6ZUJ8	805 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	TBCK	Q8TEA7	893 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	SCFD2	Q8WU76	684 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	NOL7	Q9UMY1	257 aa	Known RBP	24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	UBIAD1	Q9Y5Z9	338 aa		24.97	■■□□□ 1.59
LTBP4-227	ENST00000600026	ARIH2	O95376	493 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	CYP3A4	P08684	503 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	RARB	P10826	455 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	SMPD1	P17405	629 aa		24.96	■■□□□ 1.59
LTBP4-227	ENST00000600026	TNFAIP2	Q03169	654 aa		24.96	■■□□□ 1.59

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms