RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 HIP1O00291 1037 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 GH1P01241 217 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 NT5C2P49902 561 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 PTPN11Q06124 597 aaPredicted RBP17.12■□□□□ 0.33
IRF3-223ENST00000599223 GPNMBQ14956 572 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 CCDC178Q5BJE1 867 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 CHST3Q7LGC8 479 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 SPRED2Q7Z698 418 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 UBAC1Q9BSL1 405 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 PXMP2Q9NR77 195 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 TAF6LQ9Y6J9 622 aa17.12■□□□□ 0.33
IRF3-223ENST00000599223 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
IRF3-223ENST00000599223 B4DLN1 442 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 RFXAPO00287 272 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 ZNF286BP0CG31 522 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 RFC2P35250 354 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 HSD17B4P51659 736 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 MRPL12P52815 198 aaKnown RBP17.11■□□□□ 0.33
IRF3-223ENST00000599223 PTGISQ16647 500 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 IFIT1BQ5T764 474 aaKnown RBP17.11■□□□□ 0.33
IRF3-223ENST00000599223 SESTD1Q86VW0 696 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 IL31RAQ8NI17 732 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 MTMR8Q96EF0 704 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 KRT23Q9C075 422 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 SENP2Q9HC62 589 aa17.11■□□□□ 0.33
IRF3-223ENST00000599223 DDX41Q9UJV9 622 aaKnown RBP17.11■□□□□ 0.33
IRF3-223ENST00000599223 MRPL11Q9Y3B7 192 aaKnown RBP17.11■□□□□ 0.33
IRF3-223ENST00000599223 RGS20O76081 388 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 CFBP00751 764 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 GHRHRQ02643 423 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 STXBP2Q15833 593 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 MCF2L2Q86YR7 1114 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 MICALL1Q8N3F8 863 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
IRF3-223ENST00000599223 WNT8BQ93098 351 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 IWS1Q96ST2 819 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 MAF1Q9H063 256 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 CNNM2Q9H8M5 875 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 CERS4Q9HA82 394 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 BDP1A6H8Y1 2624 aa17.1■□□□□ 0.33
IRF3-223ENST00000599223 NR3C2P08235 984 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
IRF3-223ENST00000599223 BFSP2Q13515 415 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 ARHGEF16Q5VV41 709 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 KRT40Q6A162 431 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 TMCO2Q7Z6W1 182 aaPredicted RBP17.09■□□□□ 0.33
IRF3-223ENST00000599223 HERC6Q8IVU3 1022 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
IRF3-223ENST00000599223 EMID1Q96A84 441 aaPredicted RBP17.09■□□□□ 0.33
IRF3-223ENST00000599223 ASB2Q96Q27 587 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 NOD1Q9Y239 953 aa17.09■□□□□ 0.33
IRF3-223ENST00000599223 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.33
IRF3-223ENST00000599223 PALM3A6NDB9 673 aaPredicted RBP17.08■□□□□ 0.32
IRF3-223ENST00000599223 KLRF2D3W0D1 207 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 SORBS3O60504 671 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 F2P00734 622 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 ACTN1P12814 892 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 PTH1RQ03431 593 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 TAP1Q03518 808 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 HIC1Q14526 733 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
IRF3-223ENST00000599223 ZFP91Q96JP5 570 aaPredicted RBP17.08■□□□□ 0.32
IRF3-223ENST00000599223 PDCD2LQ9BRP1 358 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
IRF3-223ENST00000599223 HDAC6Q9UBN7 1215 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 BRWD1Q9NSI6 2320 aa17.08■□□□□ 0.32
IRF3-223ENST00000599223 LCHNA4D1U4 455 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 HAS3O00219 553 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 ZBTB5O15062 677 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 CYTH3O43739 400 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 NBNO60934 754 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 EIF3JO75822 258 aaKnown RBP17.07■□□□□ 0.32
IRF3-223ENST00000599223 CYP21A2P08686 494 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 HOXD8P13378 290 aaPredicted RBP17.07■□□□□ 0.32
IRF3-223ENST00000599223 PSEN2P49810 448 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 DEFB103AP81534 67 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 TFF2Q03403 129 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 RBL2Q08999 1139 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 GRM4Q14833 912 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 DGKDQ16760 1214 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 TRAF7Q6Q0C0 670 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 LRRC8DQ7L1W4 858 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 HOMER1Q86YM7 354 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 PPTC7Q8NI37 304 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 CAGE1Q8TC20 777 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 ADAMTS19Q8TE59 1207 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 AFAP1L1Q8TED9 768 aa17.07■□□□□ 0.32
IRF3-223ENST00000599223 SIP14410 1827 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms