RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CCL23P55773 120 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 GHRHRQ02643 423 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 ARHGAP1Q07960 439 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 NBPF20Q3BBV1 942 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 FAM47CQ5HY64 1035 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 SRBD1Q8N5C6 995 aaKnown RBP15.93■□□□□ 0.14
SCAF1-203ENST00000598359 PDCD2LQ9BRP1 358 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 MTG1Q9BT17 334 aaPredicted RBP15.93■□□□□ 0.14
SCAF1-203ENST00000598359 MAF1Q9H063 256 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 ALDH8A1Q9H2A2 487 aaPredicted RBP15.93■□□□□ 0.14
SCAF1-203ENST00000598359 HIPK3Q9H422 1215 aa15.93■□□□□ 0.14
SCAF1-203ENST00000598359 GCOM1H8Y6P7 765 aaPredicted RBP15.92■□□□□ 0.14
SCAF1-203ENST00000598359 EIF3JO75822 258 aaKnown RBP15.92■□□□□ 0.14
SCAF1-203ENST00000598359 RGS20O76081 388 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 GH1P01241 217 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 POLR2MP0CAP2 368 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 CYP2C9P11712 490 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 TMEM87BQ96K49 555 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 NOC4LQ9BVI4 516 aaKnown RBP15.92■□□□□ 0.14
SCAF1-203ENST00000598359 DDX41Q9UJV9 622 aaKnown RBP15.92■□□□□ 0.14
SCAF1-203ENST00000598359 MRVI1Q9Y6F6 885 aa15.92■□□□□ 0.14
SCAF1-203ENST00000598359 RBAK-RBAKDNI3L0D1 243 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 MMP3P08254 477 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 COL9A1P20849 921 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 KIF5BP33176 963 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 PPIGQ13427 754 aaKnown RBP eCLIP15.91■□□□□ 0.143e-10■■■□□ 15.2
SCAF1-203ENST00000598359 PGM5Q15124 567 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 BRDTQ58F21 947 aaPredicted RBP15.91■□□□□ 0.14
SCAF1-203ENST00000598359 TMEM240Q5SV17 173 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 ZNF697Q5TEC3 545 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 TMEM199Q8N511 208 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 GPKOWQ92917 476 aaPredicted RBP eCLIP15.91■□□□□ 0.148e-6■■■□□ 18.6
SCAF1-203ENST00000598359 RRP36Q96EU6 259 aaKnown RBP15.91■□□□□ 0.14
SCAF1-203ENST00000598359 MAP3K14Q99558 947 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 SPZ1Q9BXG8 430 aa15.91■□□□□ 0.14
SCAF1-203ENST00000598359 LIFRP42702 1097 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 ZNF365Q70YC5 407 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 VSIG10LQ86VR7 867 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 SCLYQ96I15 445 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 CDX2Q99626 313 aaPredicted RBP15.9■□□□□ 0.14
SCAF1-203ENST00000598359 MTA3Q9BTC8 594 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 WNT8AQ9H1J5 351 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 SLC12A7Q9Y666 1083 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 KIAA1217Q5T5P2 1943 aa15.9■□□□□ 0.14
SCAF1-203ENST00000598359 CPA1P15085 419 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 CCND2P30279 289 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 SP2Q02086 613 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 TRAF1Q13077 416 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 RNF20Q5VTR2 975 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 USP17L6PQ6QN14 398 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 TMTC2Q8N394 836 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 MAFAQ8NHW3 353 aaPredicted RBP15.89■□□□□ 0.13
SCAF1-203ENST00000598359 KAT2BQ92831 832 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 BCAS3Q9H6U6 928 aa15.89■□□□□ 0.13
SCAF1-203ENST00000598359 MAP3K20Q9NYL2 800 aaKnown RBP15.89■□□□□ 0.13
SCAF1-203ENST00000598359 SCN10AQ9Y5Y9 1956 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 GRXCR1A8MXD5 290 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 KPNA6O60684 536 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 ZNF286BP0CG31 522 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 SMAD3P84022 425 aaKnown RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 EXOSC10Q01780 885 aaKnown RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 TMTC3Q6ZXV5 915 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 SAMD3Q8N6K7 520 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 FANCBQ8NB91 859 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 SYMPKQ92797 1274 aaKnown RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 SEZ6LQ9BYH1 1024 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 TTYH1Q9H313 450 aaPredicted RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 IL23AQ9NPF7 189 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 SEC63Q9UGP8 760 aaKnown RBP15.88■□□□□ 0.13
SCAF1-203ENST00000598359 BRPF3Q9ULD4 1205 aa15.88■□□□□ 0.13
SCAF1-203ENST00000598359 GGPS1O95749 300 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 CALM1P0DP23 149 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 CALM2P0DP24 149 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 CALM3P0DP25 149 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 GNAQP50148 359 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 MRPS9P82933 396 aaKnown RBP15.87■□□□□ 0.13
SCAF1-203ENST00000598359 NFRKBQ6P4R8 1299 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 APOA5Q6Q788 366 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 SGMS1Q86VZ5 419 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 VWCEQ96DN2 955 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 RTEL1Q9NZ71 1219 aa15.87■□□□□ 0.13
SCAF1-203ENST00000598359 CXXC1Q9P0U4 656 aaPredicted RBP15.87■□□□□ 0.13
SCAF1-203ENST00000598359 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
SCAF1-203ENST00000598359 MEIS2O14770 477 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 UBA1P22314 1058 aaKnown RBP15.86■□□□□ 0.13
SCAF1-203ENST00000598359 SMARCA1P28370 1054 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 PBX2P40425 430 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 LAMC2Q13753 1193 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 DGKDQ16760 1214 aa15.86■□□□□ 0.13
SCAF1-203ENST00000598359 UBE2SQ16763 222 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms