RNA–Protein interactions for RNA: ENST00000597023.1

PPFIA4-208, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 4

Gene PPFIA4, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-208ENST00000597023 CCDC82Q8N4S0 544 aa18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 SRBD1Q8N5C6 995 aaKnown RBP18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 TCEANC2Q96MN5 208 aa18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 WNT8AQ9H1J5 351 aa18.02■□□□□ 0.48
PPFIA4-208ENST00000597023 GRXCR1A8MXD5 290 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 CDC45O75419 566 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 MMP3P08254 477 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 KIF5BP33176 963 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 GPKOWQ92917 476 aaPredicted RBP eCLIP18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 SEMA6BQ9H3T3 888 aa18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 LAMA2P24043 3122 aaKnown RBP18.01■□□□□ 0.47
PPFIA4-208ENST00000597023 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
PPFIA4-208ENST00000597023 RBAK-RBAKDNI3L0D1 243 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 KPNA6O60684 536 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 LIFRP42702 1097 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 ADCK5Q3MIX3 580 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 VSIG10LQ86VR7 867 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
PPFIA4-208ENST00000597023 TMTC2Q8N394 836 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 NEK1Q96PY6 1258 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 MAP3K14Q99558 947 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 MTA3Q9BTC8 594 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 TTYH1Q9H313 450 aaPredicted RBP18■□□□□ 0.47
PPFIA4-208ENST00000597023 IL23AQ9NPF7 189 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 STXBP5LQ9Y2K9 1186 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 SLC12A7Q9Y666 1083 aa18■□□□□ 0.47
PPFIA4-208ENST00000597023 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 FGBP02675 491 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 SP2Q02086 613 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 TRAF1Q13077 416 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 RNF20Q5VTR2 975 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 USP17L6PQ6QN14 398 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 OTOP2Q7RTS6 562 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 SAMD3Q8N6K7 520 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 KAT2BQ92831 832 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 BCAS3Q9H6U6 928 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 RTEL1Q9NZ71 1219 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 CXXC1Q9P0U4 656 aaPredicted RBP17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 SEC63Q9UGP8 760 aaKnown RBP17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 MYH6P13533 1939 aa17.99■□□□□ 0.47
PPFIA4-208ENST00000597023 SUPT20HL2P0C7V6 817 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 CCND2P30279 289 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 PBX2P40425 430 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 GNAQP50148 359 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 NFRKBQ6P4R8 1299 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 PSRC1Q6PGN9 363 aaPredicted RBP17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 DEFB128Q7Z7B8 93 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 MICU3Q86XE3 530 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 SMARCC2Q8TAQ2 1214 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 CDX2Q99626 313 aaPredicted RBP17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 ALG1Q9BT22 464 aa17.98■□□□□ 0.47
PPFIA4-208ENST00000597023 GGPS1O95749 300 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 ZNF286BP0CG31 522 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 CALM1P0DP23 149 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 CALM2P0DP24 149 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 CALM3P0DP25 149 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 MRPS9P82933 396 aaKnown RBP17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 EXOSC10Q01780 885 aaKnown RBP17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 LAMC2Q13753 1193 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 DGKDQ16760 1214 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 FANCBQ8NB91 859 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 VWCEQ96DN2 955 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 SPATA33Q96N06 139 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 LZTS2Q9BRK4 669 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 NOD1Q9Y239 953 aa17.97■□□□□ 0.47
PPFIA4-208ENST00000597023 MEIS2O14770 477 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 CPA1P15085 419 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 UBA1P22314 1058 aaKnown RBP17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 DNAJB2P25686 324 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 PSEN2P49810 448 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 PTGISQ16647 500 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 CELF3Q5SZQ8 465 aaKnown RBP17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 RASIP1Q5U651 963 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 MYSM1Q5VVJ2 828 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 GDF6Q6KF10 455 aaPredicted RBP17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 TMTC3Q6ZXV5 915 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 MYLIPQ8WY64 445 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 HERVK_113Q902F9 699 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 CUL5Q93034 780 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 BRPF3Q9ULD4 1205 aa17.96■□□□□ 0.47
PPFIA4-208ENST00000597023 COL6A3P12111 3177 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 HSDL1Q3SXM5 330 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 SYNE3Q6ZMZ3 975 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 DHX32Q7L7V1 743 aaKnown RBP17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 SGMS1Q86VZ5 419 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 PPTC7Q8NI37 304 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 EMID1Q96A84 441 aaPredicted RBP17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 PBX4Q9BYU1 374 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 MLXIPQ9HAP2 919 aa17.95■□□□□ 0.46
PPFIA4-208ENST00000597023 HDAC6Q9UBN7 1215 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms