RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 SGMS1Q86VZ5 419 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 SAMD3Q8N6K7 520 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 AFG1LQ8WV93 481 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 ZFP91Q96JP5 570 aaPredicted RBP15.11■□□□□ 0.01
LIG1-212ENST00000596549 TCEANC2Q96MN5 208 aa15.11■□□□□ 0.01
LIG1-212ENST00000596549 DDX41Q9UJV9 622 aaKnown RBP15.11■□□□□ 0.01
LIG1-212ENST00000596549 GCOM1H8Y6P7 765 aaPredicted RBP15.1■□□□□ 0.01
LIG1-212ENST00000596549 EIF3JO75822 258 aaKnown RBP15.1■□□□□ 0.01
LIG1-212ENST00000596549 POLR2MP0CAP2 368 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 ACRP10323 421 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 MYCLP12524 364 aaPredicted RBP15.1■□□□□ 0.01
LIG1-212ENST00000596549 KIF5BP33176 963 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 SMAD3P84022 425 aaKnown RBP15.1■□□□□ 0.01
LIG1-212ENST00000596549 PPIGQ13427 754 aaKnown RBP eCLIP15.1■□□□□ 0.013e-7■■□□□ 14.4
LIG1-212ENST00000596549 NBPF20Q3BBV1 942 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 TMEM240Q5SV17 173 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 RASIP1Q5U651 963 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 FAM109BQ6ICB4 259 aaPredicted RBP15.1■□□□□ 0.01
LIG1-212ENST00000596549 VSIG10LQ86VR7 867 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 FCHSD1Q86WN1 690 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 MICU3Q86XE3 530 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 GPKOWQ92917 476 aaPredicted RBP eCLIP15.1■□□□□ 0.01
LIG1-212ENST00000596549 VWCEQ96DN2 955 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 SEZ6LQ9BYH1 1024 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 MRVI1Q9Y6F6 885 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 CNTNAP5Q8WYK1 1306 aa15.1■□□□□ 0.01
LIG1-212ENST00000596549 CYP2C9P11712 490 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 UBA1P22314 1058 aaKnown RBP15.09■□□□□ 0.01
LIG1-212ENST00000596549 SMARCA1P28370 1054 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 CCL23P55773 120 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 TRAF1Q13077 416 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 RNF20Q5VTR2 975 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 APOA5Q6Q788 366 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 TMEM199Q8N511 208 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 KAT2BQ92831 832 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 EMID1Q96A84 441 aaPredicted RBP15.09■□□□□ 0.01
LIG1-212ENST00000596549 RRP36Q96EU6 259 aaKnown RBP15.09■□□□□ 0.01
LIG1-212ENST00000596549 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 NEK1Q96PY6 1258 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 CTAGE1Q96RT6 745 aa15.09■□□□□ 0.01
LIG1-212ENST00000596549 TTYH1Q9H313 450 aaPredicted RBP15.09■□□□□ 0.01
LIG1-212ENST00000596549 TET1Q8NFU7 2136 aa15.08■□□□□ 0.01
LIG1-212ENST00000596549 hCG_1642624A0A1W2PR95 340 aa15.08■□□□□ 0
LIG1-212ENST00000596549 MEIS2O14770 477 aa15.08■□□□□ 0
LIG1-212ENST00000596549 SORBS3O60504 671 aa15.08■□□□□ 0
LIG1-212ENST00000596549 CALM1P0DP23 149 aa15.08■□□□□ 0
LIG1-212ENST00000596549 CALM2P0DP24 149 aa15.08■□□□□ 0
LIG1-212ENST00000596549 CALM3P0DP25 149 aa15.08■□□□□ 0
LIG1-212ENST00000596549 CCND2P30279 289 aa15.08■□□□□ 0
LIG1-212ENST00000596549 MRPS9P82933 396 aaKnown RBP15.08■□□□□ 0
LIG1-212ENST00000596549 EXOSC10Q01780 885 aaKnown RBP15.08■□□□□ 0
LIG1-212ENST00000596549 SP2Q02086 613 aa15.08■□□□□ 0
LIG1-212ENST00000596549 TSGA10IPQ3SY00 556 aa15.08■□□□□ 0
LIG1-212ENST00000596549 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
LIG1-212ENST00000596549 FAM47CQ5HY64 1035 aa15.08■□□□□ 0
LIG1-212ENST00000596549 ZNF697Q5TEC3 545 aa15.08■□□□□ 0
LIG1-212ENST00000596549 NFRKBQ6P4R8 1299 aa15.08■□□□□ 0
LIG1-212ENST00000596549 PSRC1Q6PGN9 363 aaPredicted RBP15.08■□□□□ 0
LIG1-212ENST00000596549 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
LIG1-212ENST00000596549 TMTC2Q8N394 836 aa15.08■□□□□ 0
LIG1-212ENST00000596549 SCLYQ96I15 445 aa15.08■□□□□ 0
LIG1-212ENST00000596549 IL23AQ9NPF7 189 aa15.08■□□□□ 0
LIG1-212ENST00000596549 BRPF3Q9ULD4 1205 aa15.08■□□□□ 0
LIG1-212ENST00000596549 SLC12A7Q9Y666 1083 aa15.08■□□□□ 0
LIG1-212ENST00000596549 EYSQ5T1H1 3165 aa15.08■□□□□ 0
LIG1-212ENST00000596549 COL4A4P53420 1690 aaPredicted RBP15.07■□□□□ 0
LIG1-212ENST00000596549 KPNA6O60684 536 aa15.07■□□□□ 0
LIG1-212ENST00000596549 F2P00734 622 aa15.07■□□□□ 0
LIG1-212ENST00000596549 ZNF286BP0CG31 522 aa15.07■□□□□ 0
LIG1-212ENST00000596549 HOXD8P13378 290 aaPredicted RBP15.07■□□□□ 0
LIG1-212ENST00000596549 GNAQP50148 359 aa15.07■□□□□ 0
LIG1-212ENST00000596549 SEMA3FQ13275 785 aa15.07■□□□□ 0
LIG1-212ENST00000596549 HSDL1Q3SXM5 330 aa15.07■□□□□ 0
LIG1-212ENST00000596549 ZNF365Q70YC5 407 aa15.07■□□□□ 0
LIG1-212ENST00000596549 PPTC7Q8NI37 304 aa15.07■□□□□ 0
LIG1-212ENST00000596549 LZTS2Q9BRK4 669 aa15.07■□□□□ 0
LIG1-212ENST00000596549 SEC63Q9UGP8 760 aaKnown RBP15.07■□□□□ 0
LIG1-212ENST00000596549 STXBP5LQ9Y2K9 1186 aa15.07■□□□□ 0
LIG1-212ENST00000596549 PIK3CDO00329 1044 aa15.06■□□□□ 0
LIG1-212ENST00000596549 GGPS1O95749 300 aa15.06■□□□□ 0
LIG1-212ENST00000596549 CPA1P15085 419 aa15.06■□□□□ 0
LIG1-212ENST00000596549 PTPN11Q06124 597 aaPredicted RBP15.06■□□□□ 0
LIG1-212ENST00000596549 MYSM1Q5VVJ2 828 aa15.06■□□□□ 0
LIG1-212ENST00000596549 GDF6Q6KF10 455 aaPredicted RBP15.06■□□□□ 0
LIG1-212ENST00000596549 DHX32Q7L7V1 743 aaKnown RBP15.06■□□□□ 0
LIG1-212ENST00000596549 SESTD1Q86VW0 696 aa15.06■□□□□ 0
LIG1-212ENST00000596549 CCDC82Q8N4S0 544 aa15.06■□□□□ 0
LIG1-212ENST00000596549 FANCBQ8NB91 859 aa15.06■□□□□ 0
LIG1-212ENST00000596549 KCNB2Q92953 911 aa15.06■□□□□ 0
LIG1-212ENST00000596549 INPP4AQ96PE3 977 aaPredicted RBP15.06■□□□□ 0
LIG1-212ENST00000596549 BCAS3Q9H6U6 928 aa15.06■□□□□ 0
LIG1-212ENST00000596549 CXXC1Q9P0U4 656 aaPredicted RBP15.06■□□□□ 0
LIG1-212ENST00000596549 GRXCR1A8MXD5 290 aa15.05■□□□□ -0
LIG1-212ENST00000596549 RBAK-RBAKDNI3L0D1 243 aa15.05■□□□□ -0
LIG1-212ENST00000596549 HAS3O00219 553 aa15.05■□□□□ -0
LIG1-212ENST00000596549 SUPT20HL2P0C7V6 817 aa15.05■□□□□ -0
LIG1-212ENST00000596549 DNAJB2P25686 324 aa15.05■□□□□ -0
LIG1-212ENST00000596549 HSPA4P34932 840 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms