RNA–Protein interactions for RNA: ENST00000596411.1

SPTBN4-209, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 2

Gene SPTBN4, Length 1,885 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-209ENST00000596411 TERF2Q15554 542 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 CCDC96Q2M329 555 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 FLAD1Q8NFF5 587 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 PSTPIP2Q9H939 334 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 ABL1P00519 1130 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 UBE2SQ16763 222 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 VWA3BQ502W6 1294 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 DNAJC18Q9H819 358 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 AGPAT5Q9NUQ2 364 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 SIK3Q9Y2K2 1263 aa25.6■■□□□ 1.69
SPTBN4-209ENST00000596411 USP17L10C9JJH3 530 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 SCNN1DP51172 638 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 AP3B2Q13367 1082 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 DOK7Q18PE1 504 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 LRRC55Q6ZSA7 311 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 TRAPPC11Q7Z392 1133 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 CCDC84Q86UT8 332 aaPredicted RBP25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 DDX12PQ92771 950 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 PURBQ96QR8 312 aaKnown RBP25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 EDEM3Q9BZQ6 932 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 ANKZF1Q9H8Y5 726 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 KANSL2Q9H9L4 492 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 MYO6Q9UM54 1294 aa25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 COL2A1P02458 1487 aaPredicted RBP25.59■■□□□ 1.69
SPTBN4-209ENST00000596411 KRT86O43790 486 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 NFIAQ12857 509 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 STRIP1Q5VSL9 837 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 DNAJC19Q96DA6 116 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 NUDT12Q9BQG2 462 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 PLAGL2Q9UPG8 496 aa25.58■■□□□ 1.69
SPTBN4-209ENST00000596411 CTAGE15A4D2H0 777 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 CTAGE8P0CG41 777 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 ZCWPW2Q504Y3 356 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 PAPD7Q5XG87 772 aaKnown RBP25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 CTAGE6Q86UF2 777 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 CTAGE4Q8IX94 777 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 TSG101Q99816 390 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 MXD3Q9BW11 206 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 TSGA10Q9BZW7 698 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 NDST4Q9H3R1 872 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 NHEJ1Q9H9Q4 299 aaPredicted RBP25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 KCNMB3Q9NPA1 279 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 ANO9A1A5B4 782 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 PLSCR1O15162 318 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 TATDN1Q6P1N9 297 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 KCNK18Q7Z418 384 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 COL23A1Q86Y22 540 aaPredicted RBP25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 TEX2Q8IWB9 1127 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 PI4KBQ9UBF8 816 aa25.57■■□□□ 1.68
SPTBN4-209ENST00000596411 IPO7O95373 1038 aaKnown RBP25.56■■□□□ 1.68
SPTBN4-209ENST00000596411 EPC1Q9H2F5 836 aa25.56■■□□□ 1.68
SPTBN4-209ENST00000596411 PCDHA12Q9UN75 941 aa25.56■■□□□ 1.68
SPTBN4-209ENST00000596411 G3V3G9 751 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 MPHOSPH10O00566 681 aaKnown RBP25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 QRICH1Q2TAL8 776 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 DCAF8Q5TAQ9 597 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 KCTD1Q719H9 257 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 CRYGNQ8WXF5 182 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 HPS3Q969F9 1004 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 JAKMIP2Q96AA8 810 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 GUCA1BQ9UMX6 200 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 SEC31AO94979 1220 aaKnown RBP25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 LCA5LO95447 670 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 HSPA1LP34931 641 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 SLC16A2P36021 539 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 COASYQ13057 564 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 CCDC122Q5T0U0 273 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 DYMQ7RTS9 669 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 GMCL1P1Q8NEA9 526 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 RPGRIP1Q96KN7 1286 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 FUT8Q9BYC5 575 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 PUF60Q9UHX1 559 aaKnown RBP25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 SYNPO2Q9UMS6 1093 aa25.55■■□□□ 1.68
SPTBN4-209ENST00000596411 TBX3O15119 743 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 KLK7P49862 253 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 VAV2P52735 878 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 ECM1Q16610 540 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 KIAA1328Q86T90 577 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 SLFN12Q8IYM2 578 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 MYOCDQ8IZQ8 938 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 CEP63Q96MT8 703 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 ANO3Q9BYT9 981 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 STK24Q9Y6E0 443 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 ATRNL1Q5VV63 1379 aa25.54■■□□□ 1.68
SPTBN4-209ENST00000596411 MAP2K7O14733 419 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 ERLIN1O75477 346 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 SASH3O75995 380 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 EEF2P13639 858 aaKnown RBP25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 MMP14P50281 582 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 MARSP56192 900 aaKnown RBP25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 CERKLQ49MI3 558 aaPredicted RBP25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 DACT2Q5SW24 774 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 TMEM179Q6ZVK1 233 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 GMCL1Q96IK5 515 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 BMP2KQ9NSY1 1161 aaPredicted RBP25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 FAM198AQ9UFP1 575 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 SERPINA10Q9UK55 444 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 SLC1A4P43007 532 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 LONRF2Q1L5Z9 754 aa25.53■■□□□ 1.68
SPTBN4-209ENST00000596411 SLFN13Q68D06 897 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms