RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 RETREG2Q8NC44 543 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 SYMPKQ92797 1274 aaKnown RBP18.75■□□□□ 0.59
LIM2-202ENST00000596399 ZFP91Q96JP5 570 aaPredicted RBP18.75■□□□□ 0.59
LIM2-202ENST00000596399 FTOQ9C0B1 505 aaKnown RBP eCLIP18.75■□□□□ 0.59
LIM2-202ENST00000596399 SENP2Q9HC62 589 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 CTNNA3Q9UI47 895 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 MAD2L2Q9UI95 211 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 DDX41Q9UJV9 622 aaKnown RBP18.75■□□□□ 0.59
LIM2-202ENST00000596399 NOD1Q9Y239 953 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 TAF6LQ9Y6J9 622 aa18.75■□□□□ 0.59
LIM2-202ENST00000596399 MYH6P13533 1939 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 EPOPA6NHQ4 379 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 NR3C2P08235 984 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 PFKMP08237 780 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 HOXA13P31271 388 aaPredicted RBP18.74■□□□□ 0.59
LIM2-202ENST00000596399 PTPN11Q06124 597 aaPredicted RBP18.74■□□□□ 0.59
LIM2-202ENST00000596399 SPRED2Q7Z698 418 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 TMCO2Q7Z6W1 182 aaPredicted RBP18.74■□□□□ 0.59
LIM2-202ENST00000596399 DHX38Q92620 1227 aaKnown RBP18.74■□□□□ 0.59
LIM2-202ENST00000596399 IWS1Q96ST2 819 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 CNNM2Q9H8M5 875 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 PXMP2Q9NR77 195 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 KIAA1217Q5T5P2 1943 aa18.74■□□□□ 0.59
LIM2-202ENST00000596399 TANC1Q9C0D5 1861 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 KLRF2D3W0D1 207 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 RGS20O76081 388 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 HSD17B4P51659 736 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 PTH1RQ03431 593 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 IL31RAQ8NI17 732 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 AMNQ9BXJ7 453 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 TET1Q8NFU7 2136 aa18.73■□□□□ 0.59
LIM2-202ENST00000596399 PALM3A6NDB9 673 aaPredicted RBP18.72■□□□□ 0.59
LIM2-202ENST00000596399 EIF3JO75822 258 aaKnown RBP18.72■□□□□ 0.59
LIM2-202ENST00000596399 ZNF286BP0CG31 522 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 MYCLP12524 364 aaPredicted RBP18.72■□□□□ 0.59
LIM2-202ENST00000596399 ACTN1P12814 892 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 RFC2P35250 354 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 NT5C2P49902 561 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 BFSP2Q13515 415 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 TTC22Q5TAA0 569 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 KRT40Q6A162 431 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 HOMER1Q86YM7 354 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 MTMR8Q96EF0 704 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 ASB2Q96Q27 587 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 ALG1Q9BT22 464 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 THEGQ9P2T0 379 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 PCDHA1Q9Y5I3 950 aa18.72■□□□□ 0.59
LIM2-202ENST00000596399 TRIP12Q14669 1992 aaPredicted RBP18.72■□□□□ 0.59
LIM2-202ENST00000596399 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
LIM2-202ENST00000596399 PSEN2P49810 448 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 ZNF200P98182 395 aaPredicted RBP18.71■□□□□ 0.59
LIM2-202ENST00000596399 DGKDQ16760 1214 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 HERC6Q8IVU3 1022 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 ATXN2LQ8WWM7 1075 aaKnown RBP18.71■□□□□ 0.59
LIM2-202ENST00000596399 GPKOWQ92917 476 aaPredicted RBP eCLIP18.71■□□□□ 0.59
LIM2-202ENST00000596399 WNT8BQ93098 351 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 PIGSQ96S52 555 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 PDCD2LQ9BRP1 358 aa18.71■□□□□ 0.59
LIM2-202ENST00000596399 ZBTB5O15062 677 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 CYP21A2P08686 494 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 SP2Q02086 613 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 TFF2Q03403 129 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 TAP1Q03518 808 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 HIC1Q14526 733 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 SESTD1Q86VW0 696 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 SLC9A7Q96T83 725 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 MAF1Q9H063 256 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
LIM2-202ENST00000596399 CYTH3O43739 400 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 NBNO60934 754 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
LIM2-202ENST00000596399 MFSD10Q14728 455 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 PGM5Q15124 567 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 KIAA0753Q2KHM9 967 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 STOX1Q6ZVD7 989 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 DHX37Q8IY37 1157 aaKnown RBP18.69■□□□□ 0.58
LIM2-202ENST00000596399 C7orf31Q8N865 590 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 ARNTL2Q8WYA1 636 aa18.69■□□□□ 0.58
LIM2-202ENST00000596399 EMID1Q96A84 441 aaPredicted RBP18.69■□□□□ 0.58
LIM2-202ENST00000596399 SUPT16HQ9Y5B9 1047 aaKnown RBP18.69■□□□□ 0.58
LIM2-202ENST00000596399 LCHNA4D1U4 455 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 HAS3O00219 553 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 TNFRSF10AO00220 468 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 IFIT3O14879 490 aaKnown RBP18.68■□□□□ 0.58
LIM2-202ENST00000596399 CKBP12277 381 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 SELPP16109 830 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 CHMLP26374 656 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 DEFB103AP81534 67 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 MRPS5P82675 430 aaKnown RBP18.68■□□□□ 0.58
LIM2-202ENST00000596399 GHRHRQ02643 423 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 LAMC2Q13753 1193 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 GRM4Q14833 912 aa18.68■□□□□ 0.58
LIM2-202ENST00000596399 HSDL1Q3SXM5 330 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms