RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	BANK1	Q8NDB2	785 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	CAGE1	Q8TC20	777 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	AFAP1L1	Q8TED9	768 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	EAF2	Q96CJ1	260 aa	Predicted RBP	10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	DDRGK1	Q96HY6	314 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	A1CF	Q9NQ94	594 aa	Known RBP	10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	NYAP2	Q9P242	653 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	INSL6	Q9Y581	213 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	DCHS1	Q96JQ0	3298 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	MYO7A	Q13402	2215 aa		10.15	□□□□□ -0.78
LINC00649-208	ENST00000596365	MYH7	P12883	1935 aa		10.15	□□□□□ -0.79
LINC00649-208	ENST00000596365	RALGAPA2	Q2PPJ7	1873 aa		10.15	□□□□□ -0.79
LINC00649-208	ENST00000596365	RAD50	Q92878	1312 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	ATG2A	Q2TAZ0	1938 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	CYP2D7	A0A087X1C5	515 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	NCK2	O43639	380 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	KPNA6	O60684	536 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	COL19A1	Q14993	1142 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	SMAD2	Q15796	467 aa	Known RBP	10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	TKFC	Q3LXA3	575 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	TMEM63B	Q5T3F8	832 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	THSD4	Q6ZMP0	1018 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	TRIM67	Q6ZTA4	783 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	SSH3	Q8TE77	659 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	ZFR	Q96KR1	1074 aa	Known RBP	10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	SAMD11	Q96NU1	681 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	C17orf80	Q9BSJ5	609 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	ARMT1	Q9H993	441 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	RNF146	Q9NTX7	359 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	FAM86C1	Q9NVL1	165 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	CLDND1	Q9NY35	253 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	WDR87	Q6ZQQ6	2873 aa		10.14	□□□□□ -0.79
LINC00649-208	ENST00000596365	MYO15A	Q9UKN7	3530 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	TCRBV5S4A2T	A0A5A2	114 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	PRKAB2	O43741	272 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	CXCL10	P02778	98 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	SELP	P16109	830 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	ATP8B2	P98198	1209 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	IKBKE	Q14164	716 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	TCEAL5	Q5H9L2	206 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	FAM117B	Q6P1L5	589 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	FBXL6	Q8N531	539 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	OR6J1	Q8NGC5	347 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	MORC4	Q8TE76	937 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	ATOH1	Q92858	354 aa	Predicted RBP	10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	WDR11	Q9BZH6	1224 aa		10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	NSUN3	Q9H649	340 aa	Known RBP	10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	NOP58	Q9Y2X3	529 aa	Known RBP	10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	DDX49	Q9Y6V7	483 aa	Known RBP	10.13	□□□□□ -0.79
LINC00649-208	ENST00000596365	VPS13A	Q96RL7	3174 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	CACNA1B	Q00975	2339 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365		H3BNC9	293 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	MBD4	O95243	580 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	GPNMB	Q14956	572 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	PTGIS	Q16647	500 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	EPC2	Q52LR7	807 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	LRRC8D	Q7L1W4	858 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	RPAIN	Q86UA6	219 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	ANKK1	Q8NFD2	765 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	TRERF1	Q96PN7	1200 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	CYP39A1	Q9NYL5	469 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	CLIP2	Q9UDT6	1046 aa		10.12	□□□□□ -0.79
LINC00649-208	ENST00000596365	RBM47	A0AV96	593 aa	Known RBP	10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	PROB1	E7EW31	1015 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	C3orf80	F5H4A9	247 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	STXBP3	O00186	592 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	SMAP	O00193	183 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	NKRF	O15226	690 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	MBTPS2	O43462	519 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	BCAR3	O75815	825 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	ALAS1	P13196	640 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	RBL2	Q08999	1139 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	PTGDR	Q13258	359 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	GPM6B	Q13491	265 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	CTR9	Q6PD62	1173 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	PADI6	Q6TGC4	694 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	PPP1R13L	Q8WUF5	828 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	MKL1	Q969V6	931 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	ADD3	Q9UEY8	706 aa	Known RBP	10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	SYNPO2	Q9UMS6	1093 aa		10.11	□□□□□ -0.79
LINC00649-208	ENST00000596365	LOC102724159	A0A0B4J2E5	919 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365		A6NJR5	290 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	GOLIM4	O00461	696 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	IPO8	O15397	1037 aa	Known RBP	10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	ANP32C	O43423	234 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	NBN	O60934	754 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	AMH	P03971	560 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	BMP3	P12645	472 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	RASA1	P20936	1047 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	LTBR	P36941	435 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	STAT2	P52630	851 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	RARS	P54136	660 aa	Known RBP	10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	HTRA4	P83105	476 aa	Predicted RBP	10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	ZXDA	P98168	799 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	SMAD4	Q13485	552 aa	Known RBP	10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	PWP2	Q15269	919 aa	Known RBP	10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	CLUL1	Q15846	466 aa		10.1	□□□□□ -0.79
LINC00649-208	ENST00000596365	TCTN1	Q2MV58	587 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms