RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 TNFRSF25Q93038 417 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
DDX49-204ENST00000595858 H3BQV1 296 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 ARHGAP4P98171 946 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 FBXO16Q8IX29 292 aaPredicted RBP17.07■□□□□ 0.32
DDX49-204ENST00000595858 CRYGNQ8WXF5 182 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 ZNF333Q96JL9 665 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 VTA1Q9NP79 307 aa17.07■□□□□ 0.32
DDX49-204ENST00000595858 ZHX1Q9UKY1 873 aaPredicted RBP17.07■□□□□ 0.32
DDX49-204ENST00000595858 CCDC194A0A1B0GVG4 234 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
DDX49-204ENST00000595858 NONOQ15233 471 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX49-204ENST00000595858 MTFR1Q15390 333 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 EARS2Q5JPH6 523 aaKnown RBP17.06■□□□□ 0.32
DDX49-204ENST00000595858 TAPT1Q6NXT6 567 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 PIK3AP1Q6ZUJ8 805 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 TBCKQ8TEA7 893 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 FOXP1Q9H334 677 aaPredicted RBP17.06■□□□□ 0.32
DDX49-204ENST00000595858 HMX1Q9NP08 348 aaPredicted RBP17.06■□□□□ 0.32
DDX49-204ENST00000595858 PDGFCQ9NRA1 345 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
DDX49-204ENST00000595858 STAM2O75886 525 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 RGS20O76081 388 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 MYCP01106 439 aaPredicted RBP17.05■□□□□ 0.32
DDX49-204ENST00000595858 CYP3A4P08684 503 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 SYT1P21579 422 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 CNGA1P29973 690 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 UNC93B1Q9H1C4 597 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 EDIL3O43854 480 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 CCDC144BQ3MJ40 725 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
DDX49-204ENST00000595858 INPP4AQ96PE3 977 aaPredicted RBP17.05■□□□□ 0.32
DDX49-204ENST00000595858 RBM47A0AV96 593 aaKnown RBP17.04■□□□□ 0.32
DDX49-204ENST00000595858 SEPT4O43236 478 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 CCL5P13501 91 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 U2AF2P26368 475 aaKnown RBP eCLIP17.04■□□□□ 0.32
DDX49-204ENST00000595858 USP11P51784 963 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 GNL2Q13823 731 aaKnown RBP17.04■□□□□ 0.32
DDX49-204ENST00000595858 INF2Q27J81 1249 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 FAM184BQ9ULE4 1060 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 UBIAD1Q9Y5Z9 338 aa17.04■□□□□ 0.32
DDX49-204ENST00000595858 FAM205CA6NFA0 338 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 KIF28PB7ZC32 967 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 ITGB5P18084 799 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 ADCYAP1R1P41586 468 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 MCTP1Q6DN14 999 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 IQSEC1Q6DN90 963 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 MXRA8Q9BRK3 442 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX49-204ENST00000595858 RNF208Q9H0X6 261 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
DDX49-204ENST00000595858 AKR1A1P14550 325 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 CIITAP33076 1130 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 ZNF76P36508 570 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 GNPTABQ3T906 1256 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 NOSTRINQ8IVI9 506 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 CYP2W1Q8TAV3 490 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
DDX49-204ENST00000595858 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.02■□□□□ 0.32
DDX49-204ENST00000595858 FAM86B1E9PN63 330 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 STX6O43752 255 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 FAM86B2P0C5J1 330 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 NEK8Q86SG6 692 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 NLRX1Q86UT6 975 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 PAK6Q9NQU5 681 aaPredicted RBP17.02■□□□□ 0.32
DDX49-204ENST00000595858 MYH7BA7E2Y1 1941 aa17.02■□□□□ 0.32
DDX49-204ENST00000595858 LRRC37A2A6NM11 1700 aa17.02■□□□□ 0.31
DDX49-204ENST00000595858 MEIS1O00470 390 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 ADCY6O43306 1168 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 ICAM3P32942 547 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 TMEM63BQ5T3F8 832 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 CCDC62Q6P9F0 684 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 GPRASP2Q96D09 838 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 DDX20Q9UHI6 824 aaKnown RBP17.01■□□□□ 0.31
DDX49-204ENST00000595858 MTMR6Q9Y217 621 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 MRVI1Q9Y6F6 885 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 SPATA31C2B4DYI2 1134 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 ARIH2O95376 493 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 TXNP10599 105 aaKnown RBP17.01■□□□□ 0.31
DDX49-204ENST00000595858 TGFB3P10600 412 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 SMPD1P17405 629 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 SEMA3FQ13275 785 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 DUSP28Q4G0W2 176 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 ANO1Q5XXA6 986 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 LHX8Q68G74 356 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 KCNV1Q6PIU1 500 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 NIPA1Q7RTP0 329 aa17.01■□□□□ 0.31
DDX49-204ENST00000595858 DDX41Q9UJV9 622 aaKnown RBP17.01■□□□□ 0.31
DDX49-204ENST00000595858 IGLV3-22A0A075B6J6 115 aa17■□□□□ 0.31
DDX49-204ENST00000595858 CYP3A7-CYP3A51PA0A087WV96 503 aa17■□□□□ 0.31
DDX49-204ENST00000595858 MAFGO15525 162 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms