RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 NSMFQ6X4W1 530 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 RIOX2Q8IUF8 465 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 CCAR1Q8IX12 1150 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 GDF15Q99988 308 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 MAF1Q9H063 256 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 SPATC1LQ9H0A9 340 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 ACAD9Q9H845 621 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 RBPJLQ9UBG7 517 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 MORC2Q9Y6X9 1032 aaPredicted RBP14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 RLFQ13129 1914 aa14.82□□□□□ -0.04
SHKBP1-209ENST00000595803 PARP14Q460N5 1801 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 A0A1W2PQD8 194 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 WNT7AO00755 349 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 MARCH6O60337 910 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 ECM2O94769 699 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 GCFC2P16383 781 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 PTPREP23469 700 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 BMP8BP34820 402 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 ARHGAP4P98171 946 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 ATP2C1P98194 919 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 GHRHRQ02643 423 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 LRIT3Q3SXY7 679 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 PPP4R3AQ6IN85 833 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 NCAPG2Q86XI2 1143 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 GPT2Q8TD30 523 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 SYTL5Q8TDW5 730 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 SMCR8Q8TEV9 937 aaPredicted RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 U2AF1L4Q8WU68 220 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 FERMT2Q96AC1 680 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 SRPRBQ9Y5M8 271 aaKnown RBP14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 ALPK3Q96L96 1907 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 SMCHD1A6NHR9 2005 aa14.81□□□□□ -0.04
SHKBP1-209ENST00000595803 LAD1O00515 517 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 CNMDO75829 334 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 CYP2C8P10632 490 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 SREBF1P36956 1147 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 GCLCP48506 637 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 RPS6P62753 249 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 BAATQ14032 418 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 KLHL40Q2TBA0 621 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 Q3C1V9 767 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 ARL6IP4Q66PJ3 421 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 POTEEQ6S8J3 1075 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 C4orf32Q8N8J7 132 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 GPRC5AQ8NFJ5 357 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 PARK7Q99497 189 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 ANP32EQ9BTT0 268 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 SRRDQ9UH36 339 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 DDX25Q9UHL0 483 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 FBXO2Q9UK22 296 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 MUC3AQ02505 3323 aa14.8□□□□□ -0.04
SHKBP1-209ENST00000595803 PRUNE2Q8WUY3 3088 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 NEMFO60524 1076 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 PEX10O60683 326 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 TDP2O95551 362 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CYP3A4P08684 503 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 COL9A1P20849 921 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CMA1P23946 247 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CTGFP29279 349 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CCNA1P78396 465 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 AXDND1Q5T1B0 1012 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 MOXD1Q6UVY6 613 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 DTHD1Q6ZMT9 781 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CCDC73Q6ZRK6 1079 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 RPTORQ8N122 1335 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 ANKRD35Q8N283 1001 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 FSIP1Q8NA03 581 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 RAET1EQ8TD07 263 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 MRPS27Q92552 414 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 CLIC6Q96NY7 704 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 TAAR1Q96RJ0 339 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 MOV10L1Q9BXT6 1211 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 FAM13BQ9NYF5 915 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 MRVI1Q9Y6F6 885 aa14.79□□□□□ -0.04
SHKBP1-209ENST00000595803 COL11A1P12107 1806 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 LAMA2P24043 3122 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 CYP3A7-CYP3A51PA0A087WV96 503 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 EDIL3O43854 480 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 OR52Z1P0C646 297 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 ERCC3P19447 782 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 CYP3A7P24462 503 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 PRPHP41219 470 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 CALCRLQ16602 461 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 ARHGEF16Q5VV41 709 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 SLC30A10Q6XR72 485 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 SYAP1Q96A49 352 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 TMEM60Q9H2L4 133 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 MROH8Q9H579 483 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 TXNRD2Q9NNW7 524 aa14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 ZCCHC17Q9NP64 241 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-209ENST00000595803 VWA3AA6NCI4 1184 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 LIG1P18858 919 aa14.77□□□□□ -0.05
SHKBP1-209ENST00000595803 CIITAP33076 1130 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms