RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 C6orf222P0C671 652 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 GJA9P57773 515 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 MRPS9P82933 396 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 CPLX2Q6PUV4 134 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 TLK2Q86UE8 772 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 VSIG10LQ86VR7 867 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 KLHDC9Q8NEP7 349 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 SCFD2Q8WU76 684 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 FERMT2Q96AC1 680 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 LIMCH1Q9UPQ0 1083 aa15.82■□□□□ 0.12
SHKBP1-207ENST00000595631 ESYT2A0FGR8 921 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 SPDYE3A6NKU9 549 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 KBTBD13C9JR72 458 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 DYNC1LI2O43237 492 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 JAK2O60674 1132 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 TXNP10599 105 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 CAPN2P17655 700 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 MKI67P46013 3256 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 LY6KQ17RY6 165 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 DUSP28Q4G0W2 176 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 JAKMIP3Q5VZ66 844 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 CCDC62Q6P9F0 684 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 RNF180Q86T96 592 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 CCDC83Q8IWF9 413 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 RASGRP4Q8TDF6 673 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 SENP6Q9GZR1 1112 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 ZMYND12Q9H0C1 365 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 STK36Q9NRP7 1315 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 GJB4Q9NTQ9 266 aa15.81■□□□□ 0.12
SHKBP1-207ENST00000595631 SORBS3O60504 671 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 CDKL5O76039 1030 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 CLK2P49760 499 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 ATN1P54259 1190 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 TTLL4Q14679 1199 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 KCNA10Q16322 511 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 CCSAPQ6IQ19 270 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 ANO3Q9BYT9 981 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 AP5M1Q9H0R1 490 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 MRVI1Q9Y6F6 885 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 PDE4DIPQ5VU43 2346 aa15.8■□□□□ 0.12
SHKBP1-207ENST00000595631 FOSBP53539 338 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 FSCN1Q16658 493 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 GNASQ5JWF2 1037 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 PCNX4Q63HM2 1172 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 CCDC148Q8NFR7 591 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 CCDC12Q8WUD4 166 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 C6orf50Q9HD87 102 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 PCDH10Q9P2E7 1040 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 DDX41Q9UJV9 622 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 KCNJ14Q9UNX9 436 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 PHF24Q9UPV7 400 aa15.79■□□□□ 0.12
SHKBP1-207ENST00000595631 WDR81Q562E7 1941 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 A0A1W2PQ45 241 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 A0A1W2PQY0 241 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 ASGR1P07306 291 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 CST5P28325 142 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 ACLYP53396 1101 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 NLRP5P59047 1200 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 SP2Q02086 613 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 ARHGAP1Q07960 439 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 SEMA3FQ13275 785 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 LRRC26Q2I0M4 334 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 REXO1Q8N1G1 1221 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 BCAS3Q9H6U6 928 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 SPC25Q9HBM1 224 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 SH3GLB2Q9NR46 395 aa15.78■□□□□ 0.12
SHKBP1-207ENST00000595631 SCN10AQ9Y5Y9 1956 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 ST18O60284 1047 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 NKX3-2P78367 333 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 AP3B2Q13367 1082 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 NPY5RQ15761 445 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 DPF3Q92784 378 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 INPP4AQ96PE3 977 aaPredicted RBP15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 TSEN34Q9BSV6 310 aaKnown RBP15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 ALG1Q9BT22 464 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 GLT8D2Q9H1C3 349 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 Q9Y3F1 56 aa15.77■□□□□ 0.12
SHKBP1-207ENST00000595631 LTBP2Q14767 1821 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 NKRFO15226 690 aaKnown RBP eCLIP15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 FOSP01100 380 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 GH1P01241 217 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 ITGB5P18084 799 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 UBA1P22314 1058 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 GNA11P29992 359 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 SREBF1P36956 1147 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 CXCL17Q6UXB2 119 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 PCSK9Q8NBP7 692 aaKnown RBP15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 CYP2W1Q8TAV3 490 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 AFG1LQ8WV93 481 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 ZSCAN31Q96LW9 406 aaPredicted RBP15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 HTATIP2Q9BUP3 242 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
SHKBP1-207ENST00000595631 PCDHA4Q9UN74 947 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms