RNA–Protein interactions for RNA: ENST00000595240.5

IRF3-210, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-210ENST00000595240 TRPV6Q9H1D0 765 aa18.52■□□□□ 0.56
IRF3-210ENST00000595240 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
IRF3-210ENST00000595240 DDX41Q9UJV9 622 aaKnown RBP18.52■□□□□ 0.56
IRF3-210ENST00000595240 FRMPD4Q14CM0 1322 aa18.51■□□□□ 0.55
IRF3-210ENST00000595240 B4GALT4O60513 344 aa18.51■□□□□ 0.55
IRF3-210ENST00000595240 HMGB1P09429 215 aaKnown RBP18.51■□□□□ 0.55
IRF3-210ENST00000595240 MYCLP12524 364 aaPredicted RBP18.51■□□□□ 0.55
IRF3-210ENST00000595240 APOA5Q6Q788 366 aa18.51■□□□□ 0.55
IRF3-210ENST00000595240 AFG1LQ8WV93 481 aa18.51■□□□□ 0.55
IRF3-210ENST00000595240 EMID1Q96A84 441 aaPredicted RBP18.51■□□□□ 0.55
IRF3-210ENST00000595240 ALDH8A1Q9H2A2 487 aaPredicted RBP18.51■□□□□ 0.55
IRF3-210ENST00000595240 MRVI1Q9Y6F6 885 aa18.51■□□□□ 0.55
IRF3-210ENST00000595240 PIK3CDO00329 1044 aa18.5■□□□□ 0.55
IRF3-210ENST00000595240 HSPA4P34932 840 aa18.5■□□□□ 0.55
IRF3-210ENST00000595240 SYNE3Q6ZMZ3 975 aa18.5■□□□□ 0.55
IRF3-210ENST00000595240 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
IRF3-210ENST00000595240 LAMA2P24043 3122 aaKnown RBP18.49■□□□□ 0.55
IRF3-210ENST00000595240 REC8O95072 547 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 MMP3P08254 477 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 CCND2P30279 289 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 NFRKBQ6P4R8 1299 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 KCNV1Q6PIU1 500 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 PPP1R12CQ9BZL4 782 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 HIPK3Q9H422 1215 aa18.49■□□□□ 0.55
IRF3-210ENST00000595240 MEIS2O14770 477 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 CSF2RAP15509 400 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 CYP2C18P33260 490 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 PPIGQ13427 754 aaKnown RBP eCLIP18.48■□□□□ 0.555e-8■■□□□ 13.4
IRF3-210ENST00000595240 LAMC2Q13753 1193 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 CCDC82Q8N4S0 544 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 PPTC7Q8NI37 304 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 NOC4LQ9BVI4 516 aaKnown RBP18.48■□□□□ 0.55
IRF3-210ENST00000595240 TRMT13Q9NUP7 481 aaKnown RBP18.48■□□□□ 0.55
IRF3-210ENST00000595240 RBM28Q9NW13 759 aaKnown RBP18.48■□□□□ 0.55
IRF3-210ENST00000595240 SNX14Q9Y5W7 946 aa18.48■□□□□ 0.55
IRF3-210ENST00000595240 hCG_1642624A0A1W2PR95 340 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 ZBTB43O43298 467 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 SUPT20HL2P0C7V6 817 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 TGFB3P10600 412 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 MRPS9P82933 396 aaKnown RBP18.47■□□□□ 0.55
IRF3-210ENST00000595240 FUT2Q10981 343 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 RTN1Q16799 776 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 USP17L6PQ6QN14 398 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 C16orf59Q7L2K0 433 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 DEFB123Q8N688 67 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 SMARCC2Q8TAQ2 1214 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 CUL5Q93034 780 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 ZFP91Q96JP5 570 aaPredicted RBP18.47■□□□□ 0.55
IRF3-210ENST00000595240 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
IRF3-210ENST00000595240 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
IRF3-210ENST00000595240 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 SCN10AQ9Y5Y9 1956 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 UMODL1Q5DID0 1318 aa18.47■□□□□ 0.55
IRF3-210ENST00000595240 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 STAM2O75886 525 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 HOXD8P13378 290 aaPredicted RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 CPA1P15085 419 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 UBA1P22314 1058 aaKnown RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 RCAN1P53805 252 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 PTPN11Q06124 597 aaPredicted RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 DGKDQ16760 1214 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 FAM47CQ5HY64 1035 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 CELF3Q5SZQ8 465 aaKnown RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 MYSM1Q5VVJ2 828 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 FAM109BQ6ICB4 259 aaPredicted RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 Q7L0L9 218 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 DHX37Q8IY37 1157 aaKnown RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 KAT2BQ92831 832 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 GPKOWQ92917 476 aaPredicted RBP eCLIP18.46■□□□□ 0.55
IRF3-210ENST00000595240 INPP4AQ96PE3 977 aaPredicted RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.554e-9■□□□□ 11.3
IRF3-210ENST00000595240 PSTPIP2Q9H939 334 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.55
IRF3-210ENST00000595240 KIAA1217Q5T5P2 1943 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 CNTNAP5Q8WYK1 1306 aa18.46■□□□□ 0.55
IRF3-210ENST00000595240 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
IRF3-210ENST00000595240 CYP2C9P11712 490 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 ICAM3P32942 547 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 SMAD3P84022 425 aaKnown RBP18.45■□□□□ 0.54
IRF3-210ENST00000595240 SP2Q02086 613 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 TMEM240Q5SV17 173 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 PCNX4Q63HM2 1172 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 XRRA1Q6P2D8 792 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 HEATR3Q7Z4Q2 680 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 SESTD1Q86VW0 696 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 PPP1R13LQ8WUF5 828 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 WNT8AQ9H1J5 351 aa18.45■□□□□ 0.54
IRF3-210ENST00000595240 GOLGA8AA7E2F4 631 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 GOLGA8BA8MQT2 603 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 GGPS1O95749 300 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 CCL23P55773 120 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 HSDL1Q3SXM5 330 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 RASIP1Q5U651 963 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 BLOC1S2Q6QNY1 142 aa18.44■□□□□ 0.54
IRF3-210ENST00000595240 FBXL16Q8N461 479 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms