RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 PURAQ00577 322 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 GNPTABQ3T906 1256 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 SH3RF1Q7Z6J0 888 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 ZNF713Q8N859 430 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 PIBF1Q8WXW3 757 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 BADQ92934 168 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 SNX14Q9Y5W7 946 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 FRMPD4Q14CM0 1322 aa20.45■□□□□ 0.86
SHKBP1-204ENST00000594862 KLF18A0A0U1RQI7 1052 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 MYL3P08590 195 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 TGFB3P10600 412 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 COL9A3Q14050 684 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 TMEM63BQ5T3F8 832 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 XRRA1Q6P2D8 792 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 FCHSD1Q86WN1 690 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 LRCH3Q96II8 777 aa20.44■□□□□ 0.86
SHKBP1-204ENST00000594862 GOLGA8AA7E2F4 631 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 GOLGA8BA8MQT2 603 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 ARIH2O95376 493 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 TIMP1P01033 207 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 SUPT20HL2P0C7V6 817 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 MYCLP12524 364 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 FPGSQ05932 587 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 ARHGAP1Q07960 439 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 LAMC2Q13753 1193 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 PPP1R18Q6NYC8 613 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 TCEANC2Q96MN5 208 aa20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 DDX41Q9UJV9 622 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-204ENST00000594862 CD4P01730 458 aa20.42■□□□□ 0.86
SHKBP1-204ENST00000594862 PTPN11Q06124 597 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-204ENST00000594862 PSTPIP2Q9H939 334 aa20.42■□□□□ 0.86
SHKBP1-204ENST00000594862 CNTNAP5Q8WYK1 1306 aa20.42■□□□□ 0.86
SHKBP1-204ENST00000594862 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-204ENST00000594862 SCN10AQ9Y5Y9 1956 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 MMP3P08254 477 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 CASTP20810 708 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 PTGS1P23219 599 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 RPS6KB1P23443 525 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 DGKDQ16760 1214 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 LY6KQ17RY6 165 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 NFRKBQ6P4R8 1299 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 RAB11FIP4Q86YS3 637 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 DHX37Q8IY37 1157 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 CMTR1Q8N1G2 835 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 TMEM199Q8N511 208 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 COPS5Q92905 334 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 GLT8D2Q9H1C3 349 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 EHMT1Q9H9B1 1298 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 NID2Q14112 1375 aa20.41■□□□□ 0.86
SHKBP1-204ENST00000594862 GRIN2DO15399 1336 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 METAP2P50579 478 aaKnown RBP eCLIP20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 PSMC6P62333 389 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 PCNX4Q63HM2 1172 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 Q6ZUG5 572 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 CCDC82Q8N4S0 544 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 PPTC7Q8NI37 304 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 AFG1LQ8WV93 481 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 KATNAL1Q9BW62 490 aa20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 ALDH8A1Q9H2A2 487 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 NAP1L2Q9ULW6 460 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-204ENST00000594862 SPDYE3A6NKU9 549 aa20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 MEIS2O14770 477 aa20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 IL31RAQ8NI17 732 aa20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 BRF1Q92994 677 aa20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 INPP4AQ96PE3 977 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
SHKBP1-204ENST00000594862 FIBPO43427 364 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 RGS20O76081 388 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 ITGB8P26012 769 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 ICAM3P32942 547 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 FAM47CQ5HY64 1035 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 SLC17A8Q8NDX2 589 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 CDHR1Q96JP9 859 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 TM6SF1Q9BZW5 370 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 HIPK3Q9H422 1215 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 CYP46A1Q9Y6A2 500 aa20.38■□□□□ 0.85
SHKBP1-204ENST00000594862 CUL9Q8IWT3 2517 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 B4GALT4O60513 344 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 UBA1P22314 1058 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 NAPAP54920 295 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 FUT2Q10981 343 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 NEDD9Q14511 834 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 NBPF20Q3BBV1 942 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 CELF3Q5SZQ8 465 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 RUFY3Q7L099 469 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 NLRX1Q86UT6 975 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 GIMAP8Q8ND71 665 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 CCDC12Q8WUD4 166 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
SHKBP1-204ENST00000594862 PPFIA4O75335 1185 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms