RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 POLR3EQ9NVU0 708 aa17.03■□□□□ 0.32
USE1-205ENST00000594724 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 A6NJR5 290 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 MEIS2O14770 477 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 RGS20O76081 388 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 GH1P01241 217 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 RAG1P15918 1043 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 CDC27P30260 824 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 PURAQ00577 322 aaKnown RBP17.02■□□□□ 0.32
USE1-205ENST00000594724 FAM126BQ8IXS8 530 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 PPP1R13LQ8WUF5 828 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 AFG1LQ8WV93 481 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 BRF1Q92994 677 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 FAM217BQ9NTX9 383 aaPredicted RBP17.02■□□□□ 0.32
USE1-205ENST00000594724 RBM28Q9NW13 759 aaKnown RBP17.02■□□□□ 0.32
USE1-205ENST00000594724 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
USE1-205ENST00000594724 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.32
USE1-205ENST00000594724 CNTNAP5Q8WYK1 1306 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
USE1-205ENST00000594724 PSMA5P28066 241 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 CCND2P30279 289 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 BRDTQ58F21 947 aaPredicted RBP17.01■□□□□ 0.31
USE1-205ENST00000594724 HEATR3Q7Z4Q2 680 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 GPKOWQ92917 476 aaPredicted RBP eCLIP17.01■□□□□ 0.31
USE1-205ENST00000594724 CUL5Q93034 780 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 PSTPIP2Q9H939 334 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 TBX21Q9UL17 535 aa17.01■□□□□ 0.31
USE1-205ENST00000594724 V9GY48 417 aaPredicted RBP17.01■□□□□ 0.31
USE1-205ENST00000594724 LTBP2Q14767 1821 aa17■□□□□ 0.31
USE1-205ENST00000594724 TLR3O15455 904 aaKnown RBP17■□□□□ 0.31
USE1-205ENST00000594724 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
USE1-205ENST00000594724 SORBS3O60504 671 aa17■□□□□ 0.31
USE1-205ENST00000594724 CD4P01730 458 aa17■□□□□ 0.31
USE1-205ENST00000594724 ADD1P35611 737 aaKnown RBP17■□□□□ 0.31
USE1-205ENST00000594724 MRPS9P82933 396 aaKnown RBP17■□□□□ 0.31
USE1-205ENST00000594724 FUT2Q10981 343 aa17■□□□□ 0.31
USE1-205ENST00000594724 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
USE1-205ENST00000594724 TRPV6Q9H1D0 765 aa17■□□□□ 0.31
USE1-205ENST00000594724 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
USE1-205ENST00000594724 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 TIMP1P01033 207 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
USE1-205ENST00000594724 CHMP4BP1P59074 171 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 SP2Q02086 613 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 SHHQ15465 462 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 UBE2SQ16763 222 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 C9orf50Q5SZB4 431 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
USE1-205ENST00000594724 PPP1R12CQ9BZL4 782 aa16.99■□□□□ 0.31
USE1-205ENST00000594724 KIAA1217Q5T5P2 1943 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 B4GALT4O60513 344 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 KPNA6O60684 536 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 MMP3P08254 477 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 EPHB4P54760 987 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 AGXT2Q9BYV1 514 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
USE1-205ENST00000594724 BCAS3Q9H6U6 928 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
USE1-205ENST00000594724 FRMPD4Q14CM0 1322 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 RCAN1P53805 252 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 LAMC2Q13753 1193 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 FAM47CQ5HY64 1035 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 TYW1BQ6NUM6 668 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 FBXL16Q8N461 479 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
USE1-205ENST00000594724 TRMT13Q9NUP7 481 aaKnown RBP16.97■□□□□ 0.31
USE1-205ENST00000594724 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 GGPS1O95749 300 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 UBA1P22314 1058 aaKnown RBP16.96■□□□□ 0.31
USE1-205ENST00000594724 CYP2C18P33260 490 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 NAPAP54920 295 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 FPGSQ05932 587 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 DGKDQ16760 1214 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 CELF3Q5SZQ8 465 aaKnown RBP16.96■□□□□ 0.31
USE1-205ENST00000594724 MYSM1Q5VVJ2 828 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 PCNX4Q63HM2 1172 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 MFSD5Q6N075 450 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 KAT2BQ92831 832 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 EMID1Q96A84 441 aaPredicted RBP16.96■□□□□ 0.31
USE1-205ENST00000594724 LARP6Q9BRS8 491 aaKnown RBP16.96■□□□□ 0.31
USE1-205ENST00000594724 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
USE1-205ENST00000594724 CYP46A1Q9Y6A2 500 aa16.96■□□□□ 0.31
USE1-205ENST00000594724 UMODL1Q5DID0 1318 aa16.96■□□□□ 0.3
USE1-205ENST00000594724 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
USE1-205ENST00000594724 STXBP3O00186 592 aa16.95■□□□□ 0.3
USE1-205ENST00000594724 TGFB3P10600 412 aa16.95■□□□□ 0.3
USE1-205ENST00000594724 SEMA3FQ13275 785 aa16.95■□□□□ 0.3
USE1-205ENST00000594724 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
USE1-205ENST00000594724 GNPTABQ3T906 1256 aa16.95■□□□□ 0.3
USE1-205ENST00000594724 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms