RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 CNNM2Q9H8M5 875 aa14.53□□□□□ -0.08
UPF1-203ENST00000594504 CERS4Q9HA82 394 aa14.53□□□□□ -0.08
UPF1-203ENST00000594504 ANO2Q9NQ90 1003 aa14.53□□□□□ -0.08
UPF1-203ENST00000594504 MRPL11Q9Y3B7 192 aaKnown RBP14.53□□□□□ -0.08
UPF1-203ENST00000594504 RBM8AQ9Y5S9 174 aaKnown RBP14.53□□□□□ -0.08
UPF1-203ENST00000594504 KLRF2D3W0D1 207 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 NR3C2P08235 984 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 CYP21A2P08686 494 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 MYCLP12524 364 aaPredicted RBP14.52□□□□□ -0.09
UPF1-203ENST00000594504 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.09
UPF1-203ENST00000594504 PTGISQ16647 500 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 SLC35G1Q2M3R5 365 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 PPP2R2DQ66LE6 453 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 GDF6Q6KF10 455 aaPredicted RBP14.52□□□□□ -0.09
UPF1-203ENST00000594504 CTAGE1Q96RT6 745 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 IWS1Q96ST2 819 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 ALG1Q9BT22 464 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 FTOQ9C0B1 505 aaKnown RBP eCLIP14.52□□□□□ -0.09
UPF1-203ENST00000594504 SENP2Q9HC62 589 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 PXMP2Q9NR77 195 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 MAD2L2Q9UI95 211 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 DDX41Q9UJV9 622 aaKnown RBP14.52□□□□□ -0.09
UPF1-203ENST00000594504 PCDHA11Q9Y5I1 949 aa14.52□□□□□ -0.09
UPF1-203ENST00000594504 ARHGEF15O94989 841 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
UPF1-203ENST00000594504 GPNMBQ14956 572 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 TJAP1Q5JTD0 557 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 MICALL1Q8N3F8 863 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 SYMPKQ92797 1274 aaKnown RBP14.51□□□□□ -0.09
UPF1-203ENST00000594504 AMNQ9BXJ7 453 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 NOD1Q9Y239 953 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
UPF1-203ENST00000594504 MYO9BQ13459 2157 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 TET1Q8NFU7 2136 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 EYSQ5T1H1 3165 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 PALM3A6NDB9 673 aaPredicted RBP14.5□□□□□ -0.09
UPF1-203ENST00000594504 EIF3JO75822 258 aaKnown RBP14.5□□□□□ -0.09
UPF1-203ENST00000594504 RGS20O76081 388 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 CA3P07451 260 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 PFKMP08237 780 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 ACTN1P12814 892 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 CASTP20810 708 aaKnown RBP14.5□□□□□ -0.09
UPF1-203ENST00000594504 HSD17B4P51659 736 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 TRDNQ13061 729 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 BFSP2Q13515 415 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 TMEM67Q5HYA8 995 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 TMCO2Q7Z6W1 182 aaPredicted RBP14.5□□□□□ -0.09
UPF1-203ENST00000594504 HOMER1Q86YM7 354 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 DHX38Q92620 1227 aaKnown RBP14.5□□□□□ -0.09
UPF1-203ENST00000594504 MTMR8Q96EF0 704 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 PIGSQ96S52 555 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 HDAC6Q9UBN7 1215 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 PCDHA1Q9Y5I3 950 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 CDH23Q9H251 3354 aa14.5□□□□□ -0.09
UPF1-203ENST00000594504 EPOPA6NHQ4 379 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 ZBTB5O15062 677 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 RFC2P35250 354 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 PSEN2P49810 448 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 ZNF200P98182 395 aaPredicted RBP14.49□□□□□ -0.09
UPF1-203ENST00000594504 TCTN1Q2MV58 587 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 KRT40Q6A162 431 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 SPRED2Q7Z698 418 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 DHX37Q8IY37 1157 aaKnown RBP14.49□□□□□ -0.09
UPF1-203ENST00000594504 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.09
UPF1-203ENST00000594504 PDCD2LQ9BRP1 358 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 MAF1Q9H063 256 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 BCAS3Q9H6U6 928 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 MRVI1Q9Y6F6 885 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 PTPRSQ13332 1948 aa14.49□□□□□ -0.09
UPF1-203ENST00000594504 UNC80Q8N2C7 3258 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 E7EWF7 191 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 IFIT3O14879 490 aaKnown RBP14.48□□□□□ -0.09
UPF1-203ENST00000594504 CYTH3O43739 400 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 ZNF286BP0CG31 522 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 SP2Q02086 613 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 HIC1Q14526 733 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 PGM5Q15124 567 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 NECTIN1Q15223 517 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 DGKDQ16760 1214 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 RALYLQ86SE5 291 aaKnown RBP14.48□□□□□ -0.09
UPF1-203ENST00000594504 SESTD1Q86VW0 696 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 FCHSD1Q86WN1 690 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 PIBF1Q8WXW3 757 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 WNT8BQ93098 351 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 ASB2Q96Q27 587 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 THEGQ9P2T0 379 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 GTF2IRD1Q9UHL9 959 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 TANC1Q9C0D5 1861 aa14.48□□□□□ -0.09
UPF1-203ENST00000594504 SLC27A2O14975 620 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 NBNO60934 754 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 REC8O95072 547 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 LAMC2Q13753 1193 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 MFSD10Q14728 455 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 GRM4Q14833 912 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 KIAA0753Q2KHM9 967 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 RNF20Q5VTR2 975 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 CREB3L3Q68CJ9 461 aa14.47□□□□□ -0.09
UPF1-203ENST00000594504 STOX1Q6ZVD7 989 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms