RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
USE1-204ENST00000594399 ASB14A6NK59 587 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 WNT7AO00755 349 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 STAM2O75886 525 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 BMP15O95972 392 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 GNRH1P01148 92 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 MYCLP12524 364 aaPredicted RBP12.32□□□□□ -0.44
USE1-204ENST00000594399 NCLP19338 710 aaKnown RBP12.32□□□□□ -0.44
USE1-204ENST00000594399 CIITAP33076 1130 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 MCM7P33993 719 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 ZNF76P36508 570 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
USE1-204ENST00000594399 PRKCZQ05513 592 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 PDE4DQ08499 809 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 PPP4R3AQ6IN85 833 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 NPLOC4Q8TAT6 608 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 USP28Q96RU2 1077 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 FTOQ9C0B1 505 aaKnown RBP eCLIP12.32□□□□□ -0.44
USE1-204ENST00000594399 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
USE1-204ENST00000594399 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 GJD2Q9UKL4 321 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 CFAP45Q9UL16 551 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 CEP131Q9UPN4 1083 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 TRIM17Q9Y577 477 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 PCDHB6Q9Y5E3 794 aa12.32□□□□□ -0.44
USE1-204ENST00000594399 CYP3A7-CYP3A51PA0A087WV96 503 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 EDIL3O43854 480 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 NEMFO60524 1076 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 CYP3A7P24462 503 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 HOXD10P28358 340 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 FLT3LGP49771 235 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 MRPS9P82933 396 aaKnown RBP12.31□□□□□ -0.44
USE1-204ENST00000594399 CAP1Q01518 475 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 SF3A1Q15459 793 aaKnown RBP12.31□□□□□ -0.44
USE1-204ENST00000594399 ZNF174Q15697 407 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 STXBP2Q15833 593 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 Q4G0T1 1027 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 ANO1Q5XXA6 986 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 OLFML2BQ68BL8 750 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 ARMCX2Q7L311 632 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 VSIG10LQ86VR7 867 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 MSL3Q8N5Y2 521 aaKnown RBP12.31□□□□□ -0.44
USE1-204ENST00000594399 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 MBOAT7Q96N66 472 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 MXRA8Q9BRK3 442 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 DDX25Q9UHL0 483 aaKnown RBP12.31□□□□□ -0.44
USE1-204ENST00000594399 CLIC4Q9Y696 253 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
USE1-204ENST00000594399 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 SLC37A4O43826 429 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 YEATS4O95619 227 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 XRCC5P13010 732 aaKnown RBP12.3□□□□□ -0.44
USE1-204ENST00000594399 CYP2B6P20813 491 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 NASPP49321 788 aaPredicted RBP12.3□□□□□ -0.44
USE1-204ENST00000594399 PRMT2P55345 433 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 CEBPZQ03701 1054 aaKnown RBP12.3□□□□□ -0.44
USE1-204ENST00000594399 GNPTABQ3T906 1256 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 PRR16Q569H4 304 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 MAMDC4Q6UXC1 1216 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 NIPA1Q7RTP0 329 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 NLRX1Q86UT6 975 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 PLA2G4DQ86XP0 818 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 LENG9Q96B70 501 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
USE1-204ENST00000594399 TINF2Q9BSI4 451 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 JADE2Q9NQC1 790 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 RTEL1Q9NZ71 1219 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 SRRDQ9UH36 339 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 GABRQQ9UN88 632 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
USE1-204ENST00000594399 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
USE1-204ENST00000594399 MEIS1O00470 390 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 LAD1O00515 517 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 FIBPO43427 364 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 EIF3JO75822 258 aaKnown RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 OR52Z1P0C646 297 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 ITGB5P18084 799 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 ATP2C1P98194 919 aaPredicted RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 PTGDRQ13258 359 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 IRF5Q13568 498 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 MTMR1Q13613 665 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 STK38Q15208 465 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 CALCRLQ16602 461 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 CLEC17AQ6ZS10 378 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 VTA1Q9NP79 307 aa12.29□□□□□ -0.44
USE1-204ENST00000594399 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.29□□□□□ -0.44
USE1-204ENST00000594399 TFIP11Q9UBB9 837 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms