RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ERCC4Q92889 916 aaPredicted RBP14.91□□□□□ -0.02
VRK3-205ENST00000593919 GJA10Q969M2 543 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 GPBP1L1Q9HC44 474 aaPredicted RBP14.91□□□□□ -0.02
VRK3-205ENST00000593919 KCNMB3Q9NPA1 279 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 GTF2A2P52657 109 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 HUNKP57058 714 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 STX1AQ16623 288 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 Q4G0T1 1027 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 KRBA2Q6ZNG9 492 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 C11orf57Q6ZUT1 292 aaPredicted RBP14.91□□□□□ -0.02
VRK3-205ENST00000593919 IGSF22Q8N9C0 903 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 SPC24Q8NBT2 197 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 CNNM3Q8NE01 707 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 CYP2W1Q8TAV3 490 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 AK8Q96MA6 479 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 PAGR1Q9BTK6 254 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 ACAD9Q9H845 621 aa14.91□□□□□ -0.02
VRK3-205ENST00000593919 TTC12Q9H892 705 aaPredicted RBP14.91□□□□□ -0.02
VRK3-205ENST00000593919 RPTORQ8N122 1335 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 KIAA1217Q5T5P2 1943 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 IGLV3-22A0A075B6J6 115 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 A0A087WWV3 80 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 CETPP11597 493 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 OSBPP22059 807 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 ZNF76P36508 570 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.02
VRK3-205ENST00000593919 BAATQ14032 418 aaPredicted RBP14.9□□□□□ -0.02
VRK3-205ENST00000593919 TMEM266Q2M3C6 531 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 SPRYD7Q5W111 196 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 DHX58Q96C10 678 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 SERTAD1Q9UHV2 236 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 FRMPD4Q14CM0 1322 aa14.9□□□□□ -0.02
VRK3-205ENST00000593919 CCL15-CCL14A0A0B4J2E2 113 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 POTEMA6NI47 508 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 ACTN4O43707 911 aaKnown RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 ZBTB48P10074 688 aaPredicted RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 TXLNAP40222 546 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 CCL15Q16663 113 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 IL31RAQ8NI17 732 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 TAAR1Q96RJ0 339 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 SPATC1LQ9H0A9 340 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 A1CFQ9NQ94 594 aaKnown RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 PASKQ96RG2 1323 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 ZNFX1Q9P2E3 1918 aaKnown RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 MARCH6O60337 910 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 CNMDO75829 334 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 UBA7P41226 1012 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 KARSQ15046 597 aaKnown RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 E2F4Q16254 413 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 RIOX2Q8IUF8 465 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 BRI3BPQ8WY22 251 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 PURBQ96QR8 312 aaKnown RBP14.89□□□□□ -0.03
VRK3-205ENST00000593919 CCSER1Q9C0I3 900 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 TXNRD2Q9NNW7 524 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 PCDHA12Q9UN75 941 aa14.89□□□□□ -0.03
VRK3-205ENST00000593919 BTBD19C9JJ37 291 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 TBX3O15119 743 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 FOXN1O15353 648 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 MSH4O15457 936 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 CYP2C8P10632 490 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 CEP55Q53EZ4 464 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 SLFN12Q8IYM2 578 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 CHST13Q8NET6 341 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 ZFP91Q96JP5 570 aaPredicted RBP14.88□□□□□ -0.03
VRK3-205ENST00000593919 RMDN3Q96TC7 470 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 RAB34Q9BZG1 259 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 DISC1Q9NRI5 854 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 CYP39A1Q9NYL5 469 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 KIAA1468Q9P260 1216 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 LRWD1Q9UFC0 647 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 PNMA3Q9UL41 463 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 RABGAP1Q9Y3P9 1069 aa14.88□□□□□ -0.03
VRK3-205ENST00000593919 KIF3CO14782 793 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 OFD1O75665 1012 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 SLFN14P0C7P3 912 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 EIF2AK2P19525 551 aaKnown RBP14.87□□□□□ -0.03
VRK3-205ENST00000593919 PNOCQ13519 176 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PDIA5Q14554 519 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.87□□□□□ -0.03
VRK3-205ENST00000593919 CABP7Q86V35 215 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 MOV10L1Q9BXT6 1211 aaKnown RBP14.87□□□□□ -0.03
VRK3-205ENST00000593919 PXMP2Q9NR77 195 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 RBPJLQ9UBG7 517 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 GOLGA6L19H0YKK7 550 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PDHXO00330 501 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 CAVIN2O95810 425 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 IQCB1Q15051 598 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PGM5Q15124 567 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 SAPCD2Q86UD0 394 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 ELOA2Q8IYF1 753 aaPredicted RBP14.87□□□□□ -0.03
VRK3-205ENST00000593919 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 CEP57L1Q8IYX8 460 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 IQUBQ8NA54 791 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 RASSF8Q8NHQ8 419 aa14.87□□□□□ -0.03
VRK3-205ENST00000593919 PYM1Q9BRP8 204 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms