RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 NEK1Q96PY6 1258 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PURBQ96QR8 312 aaKnown RBP3.83□□□□□ -1.8
VRK3-204ENST00000593912 SEZ6LQ9BYH1 1024 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 OSBPL7Q9BZF2 842 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 FOXQ1Q9C009 403 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 AP5M1Q9H0R1 490 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 CLMPQ9H6B4 373 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 TLE6Q9H808 572 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 GPR108Q9NPR9 543 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PDGFCQ9NRA1 345 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 FBXO28Q9NVF7 368 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 HOXC10Q9NYD6 342 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PI4KBQ9UBF8 816 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 DUSP12Q9UNI6 340 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PLAGL2Q9UPG8 496 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 NOD1Q9Y239 953 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 PCDHGA2Q9Y5H1 932 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 MAPK8IP3Q9UPT6 1336 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 DENND4AQ7Z401 1863 aa3.83□□□□□ -1.8
VRK3-204ENST00000593912 ATMQ13315 3056 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 MYH7BA7E2Y1 1941 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 GREB1Q4ZG55 1949 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 NAV1Q8NEY1 1877 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 DNAJC25-GNG10A0A024R161 153 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 GPR75-ASB3A0A0A6YYF3 556 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 A0A1W2PRG0 241 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 LAMTOR5O43504 91 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 HYAL3O43820 417 aaPredicted RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 LILRB5O75023 590 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 EFCAB14O75071 495 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 PPFIA3O75145 1194 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 NPM3O75607 178 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 PDE8BO95263 885 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SLC25A27O95847 323 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 RB1P06400 928 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 HSPA5P11021 654 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 CKBP12277 381 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 FGFR2P21802 821 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 GUCY1A2P33402 732 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 MCAMP43121 646 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SLC4A3P48751 1232 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 NOVA1P51513 510 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 TROAPQ12815 778 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 PTGISQ16647 500 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 AASDHQ4L235 1098 aaPredicted RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 SNRNP48Q6IEG0 339 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 GDF6Q6KF10 455 aaPredicted RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 ANKRD54Q6NXT1 300 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 KANK3Q6NY19 840 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 TRAF7Q6Q0C0 670 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 EEPD1Q7L9B9 569 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 MAPKAPK5Q8IW41 473 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 TEX11Q8IYF3 940 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SPICE1Q8N0Z3 855 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 ZNF843Q8N446 348 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 MSL3Q8N5Y2 521 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 MB21D1Q8N884 522 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 TDRD5Q8NAT2 981 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 CAGE1Q8TC20 777 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SH3RF3Q8TEJ3 882 aaPredicted RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 POF1BQ8WVV4 589 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SLC39A7Q92504 469 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 TOP1MTQ969P6 601 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 DDX11Q96FC9 970 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 TRIM34Q9BYJ4 488 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 IFIH1Q9BYX4 1025 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 SPATA6Q9NWH7 488 aaPredicted RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 ZSCAN32Q9NX65 697 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 ABCF2Q9UG63 623 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SAP30BPQ9UHR5 308 aaKnown RBP3.82□□□□□ -1.8
VRK3-204ENST00000593912 KLK13Q9UKR3 277 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 PALD1Q9ULE6 856 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 SIT1Q9Y3P8 196 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 RIPK3Q9Y572 518 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 DOPEY2Q9Y3R5 2298 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 MYH1P12882 1939 aa3.82□□□□□ -1.8
VRK3-204ENST00000593912 UTP20O75691 2785 aaKnown RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 ADGRA3Q8IWK6 1321 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 TBC1D4O60343 1298 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 NTRK1P04629 796 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 CAPNS1P04632 268 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 MMP3P08254 477 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 IFIT1P09914 478 aaKnown RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 STAT3P40763 770 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 PHKA1P46020 1223 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 CCR10P46092 362 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 CNTN2Q02246 1040 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 MECOMQ03112 1051 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 TDGQ13569 410 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 SEPT2Q15019 361 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 CSRP2Q16527 193 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 DUSP6Q16828 381 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 ZNF528Q3MIS6 628 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 ZNF618Q5T7W0 954 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 STPG1Q5TH74 334 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 LAIR1Q6GTX8 287 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 ATG9AQ7Z3C6 839 aa3.81□□□□□ -1.8
VRK3-204ENST00000593912 METTL16Q86W50 562 aaKnown RBP3.81□□□□□ -1.8
VRK3-204ENST00000593912 CLEC10AQ8IUN9 316 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms