RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PFKMP08237 780 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 HSD17B4P51659 736 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 MFAP1P55081 439 aaKnown RBP12.46□□□□□ -0.41
USE1-203ENST00000593597 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.41
USE1-203ENST00000593597 SESTD1Q86VW0 696 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 IQCA1Q86XH1 822 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 ASB2Q96Q27 587 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 RMDN3Q96TC7 470 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 CERS4Q9HA82 394 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 VAT1LQ9HCJ6 419 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 GPHNQ9NQX3 736 aaPredicted RBP12.46□□□□□ -0.41
USE1-203ENST00000593597 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 MAD2L2Q9UI95 211 aa12.46□□□□□ -0.41
USE1-203ENST00000593597 DDX41Q9UJV9 622 aaKnown RBP12.46□□□□□ -0.41
USE1-203ENST00000593597 RAD50Q92878 1312 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 NLRC5Q86WI3 1866 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 HAS3O00219 553 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 GH1P01241 217 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 RFC2P35250 354 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 TAP1Q03518 808 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 RBL2Q08999 1139 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 TRIM71Q2Q1W2 868 aaKnown RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 CHST3Q7LGC8 479 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 NSUN6Q8TEA1 469 aaKnown RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 SYMPKQ92797 1274 aaKnown RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.42
USE1-203ENST00000593597 ZFP91Q96JP5 570 aaPredicted RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
USE1-203ENST00000593597 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
USE1-203ENST00000593597 LCHNA4D1U4 455 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 PALM3A6NDB9 673 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 CYTH3O43739 400 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 SORBS3O60504 671 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 KPNA6O60684 536 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 NBNO60934 754 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 F2P00734 622 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 CFBP00751 764 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 NR3C2P08235 984 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 ZNF286BP0CG31 522 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 HOXD8P13378 290 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 NT5C2P49902 561 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 CHMP4BP1P59074 171 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 DEFB103AP81534 67 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 ZNF200P98182 395 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 SP2Q02086 613 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 TFF2Q03403 129 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 PTH1RQ03431 593 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 AAMPQ13685 434 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 MBTPS1Q14703 1052 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 STXBP2Q15833 593 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 PTGISQ16647 500 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 IMMTQ16891 758 aaKnown RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 TMEM67Q5HYA8 995 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 STOX1Q6ZVD7 989 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 EMID1Q96A84 441 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 NECAB3Q96P71 396 aaPredicted RBP12.44□□□□□ -0.42
USE1-203ENST00000593597 IWS1Q96ST2 819 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 SLC9A7Q96T83 725 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 MAF1Q9H063 256 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 BCAS3Q9H6U6 928 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 HDAC6Q9UBN7 1215 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
USE1-203ENST00000593597 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 LPXNO60711 386 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 CYP21A2P08686 494 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
USE1-203ENST00000593597 PSEN2P49810 448 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 WDR5P61964 334 aaKnown RBP12.43□□□□□ -0.42
USE1-203ENST00000593597 BRDTQ58F21 947 aaPredicted RBP12.43□□□□□ -0.42
USE1-203ENST00000593597 CCDC178Q5BJE1 867 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 ARHGEF16Q5VV41 709 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 ADAMTS19Q8TE59 1207 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 MPHOSPH6Q99547 160 aaKnown RBP12.43□□□□□ -0.42
USE1-203ENST00000593597 KRT23Q9C075 422 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 MRPL11Q9Y3B7 192 aaKnown RBP12.43□□□□□ -0.42
USE1-203ENST00000593597 TELO2Q9Y4R8 837 aa12.43□□□□□ -0.42
USE1-203ENST00000593597 KLRF2D3W0D1 207 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 HIP1O00291 1037 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 DHX16O60231 1041 aaKnown RBP12.42□□□□□ -0.42
USE1-203ENST00000593597 EIF3JO75822 258 aaKnown RBP12.42□□□□□ -0.42
USE1-203ENST00000593597 CXCL10P02778 98 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 CKBP12277 381 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 BMP1P13497 986 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 POU3F3P20264 500 aaPredicted RBP12.42□□□□□ -0.42
USE1-203ENST00000593597 KCNQ1P51787 676 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 ANTXR2P58335 489 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
USE1-203ENST00000593597 BFSP2Q13515 415 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 GRM4Q14833 912 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 PGM5Q15124 567 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
USE1-203ENST00000593597 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms