RNA–Protein interactions for RNA: ENST00000593548.1

FARP1-208, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-208ENST00000593548 TMEM169Q96HH4 297 aa7.56□□□□□ -1.2
FARP1-208ENST00000593548 AP5M1Q9H0R1 490 aa7.56□□□□□ -1.2
FARP1-208ENST00000593548 SIRPGQ9P1W8 387 aa7.56□□□□□ -1.2
FARP1-208ENST00000593548 COA3Q9Y2R0 106 aaPredicted RBP7.56□□□□□ -1.2
FARP1-208ENST00000593548 PCDHA5Q9Y5H7 936 aa7.56□□□□□ -1.2
FARP1-208ENST00000593548 TRAV20A0A0B4J274 112 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 LIMS1P48059 325 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 GTF2A2P52657 109 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
FARP1-208ENST00000593548 TARBP2Q15633 366 aaKnown RBP7.55□□□□□ -1.2
FARP1-208ENST00000593548 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 CNKSR3Q6P9H4 555 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 NSMFQ6X4W1 530 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 NPM2Q86SE8 214 aaKnown RBP7.55□□□□□ -1.2
FARP1-208ENST00000593548 DCP2Q8IU60 420 aaKnown RBP7.55□□□□□ -1.2
FARP1-208ENST00000593548 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 ARHGEF4Q9NR80 690 aa7.55□□□□□ -1.2
FARP1-208ENST00000593548 ARNTLO00327 626 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 DLX3O60479 287 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 MAP4K2Q12851 820 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 IFRD2Q12894 506 aaPredicted RBP7.54□□□□□ -1.2
FARP1-208ENST00000593548 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 LCE1DQ5T752 114 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 C1QL4Q86Z23 238 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 CDC6Q99741 560 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 SPATA9Q9BWV2 254 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 CLDND1Q9NY35 253 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
FARP1-208ENST00000593548 ZBTB7AO95365 584 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 PABPC1P11940 636 aaKnown RBP7.53□□□□□ -1.2
FARP1-208ENST00000593548 PMLP29590 882 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 MC3RP41968 323 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 LSAMPQ13449 338 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 SLC9A5Q14940 896 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 YOD1Q5VVQ6 348 aaPredicted RBP7.53□□□□□ -1.2
FARP1-208ENST00000593548 TCERG1LQ5VWI1 586 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 NLRP10Q86W26 655 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 ARMC5Q96C12 935 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 TSPAN17Q96FV3 270 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 C1orf159Q96HA4 380 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 PWWP2AQ96N64 755 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 IPO9Q96P70 1041 aaKnown RBP7.53□□□□□ -1.2
FARP1-208ENST00000593548 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
FARP1-208ENST00000593548 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 ARAP1Q96P48 1450 aa7.53□□□□□ -1.2
FARP1-208ENST00000593548 BLACEA4D250 179 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 IRS4O14654 1257 aaPredicted RBP7.52□□□□□ -1.21
FARP1-208ENST00000593548 ASGR2P07307 311 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 NCAM1P13591 858 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 AFF3P51826 1226 aaKnown RBP7.52□□□□□ -1.21
FARP1-208ENST00000593548 MROH9Q5TGP6 573 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 LCNL1Q6ZST4 164 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 FAM129CQ86XR2 697 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 SRPK1Q96SB4 655 aaKnown RBP7.52□□□□□ -1.21
FARP1-208ENST00000593548 CCDC113Q9H0I3 377 aa7.52□□□□□ -1.21
FARP1-208ENST00000593548 FGFR1P11362 822 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 VMACQ2NL98 169 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 TMEM151BQ8IW70 566 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 TMEFF1Q8IYR6 380 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 SREK1Q8WXA9 508 aaKnown RBP7.51□□□□□ -1.21
FARP1-208ENST00000593548 SEC14L1Q92503 715 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 DEPDC7Q96QD5 511 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 IRS2Q9Y4H2 1338 aa7.51□□□□□ -1.21
FARP1-208ENST00000593548 IFT140Q96RY7 1462 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 SGSM2O43147 1006 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
FARP1-208ENST00000593548 CAPNS1P04632 268 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 ATF2P15336 505 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 FOXO4P98177 505 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 KCNT2Q6UVM3 1135 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 MILR1Q7Z6M3 343 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 OSBP2Q969R2 916 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 YIPF4Q9BSR8 244 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 RNF38Q9H0F5 515 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 EPB41L4AQ9HCS5 686 aaPredicted RBP7.5□□□□□ -1.21
FARP1-208ENST00000593548 PALD1Q9ULE6 856 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 KDM2BQ8NHM5 1336 aa7.5□□□□□ -1.21
FARP1-208ENST00000593548 CHD1O14646 1710 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.217e-11■■□□□ 11.9
FARP1-208ENST00000593548 H7BY64 318 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 MSCO60682 206 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 RBL2Q08999 1139 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 TESK1Q15569 626 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 SOGA3Q5TF21 947 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 AMIGO3Q86WK7 504 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 NLGN1Q8N2Q7 840 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 DCAF4Q8WV16 495 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 ZNF669Q96BR6 464 aaPredicted RBP7.49□□□□□ -1.21
FARP1-208ENST00000593548 DDX11Q96FC9 970 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 GPR27Q9NS67 375 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 SNTG2Q9NY99 539 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 PMF1-BGLAPU3KQ54 211 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 X6R8D5 127 aa7.49□□□□□ -1.21
FARP1-208ENST00000593548 EIF4G3O43432 1585 aaKnown RBP7.49□□□□□ -1.21
FARP1-208ENST00000593548 ARID1BQ8NFD5 2236 aaPredicted RBP7.48□□□□□ -1.21
FARP1-208ENST00000593548 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms