RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PARP1P09874 1014 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 EIF2AK2P19525 551 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 GPNMBQ14956 572 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 STXBP2Q15833 593 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 SESTD1Q86VW0 696 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 FBXO11Q86XK2 927 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 MCF2L2Q86YR7 1114 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 HERC6Q8IVU3 1022 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 STAG2Q8N3U4 1231 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 PHOSPHO2Q8TCD6 241 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 DHX38Q92620 1227 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 IWS1Q96ST2 819 aa19.09■□□□□ 0.65
LIG1-205ENST00000593425 DDX41Q9UJV9 622 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 MRPL11Q9Y3B7 192 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 TCF20Q9UGU0 1960 aaKnown RBP19.09■□□□□ 0.65
LIG1-205ENST00000593425 REV3LO60673 3130 aa19.08■□□□□ 0.65
LIG1-205ENST00000593425 TAP1Q03518 808 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 AAMPQ13685 434 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 IMMTQ16891 758 aaKnown RBP19.08■□□□□ 0.64
LIG1-205ENST00000593425 ARHGEF16Q5VV41 709 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 KRT40Q6A162 431 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 SPRED2Q7Z698 418 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 CAGE1Q8TC20 777 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 AFAP1L1Q8TED9 768 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 UHRF1Q96T88 793 aaPredicted RBP19.08■□□□□ 0.64
LIG1-205ENST00000593425 MTCH2Q9Y6C9 303 aa19.08■□□□□ 0.64
LIG1-205ENST00000593425 BAIAP3O94812 1187 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 CFBP00751 764 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 CASTP20810 708 aaKnown RBP19.07■□□□□ 0.64
LIG1-205ENST00000593425 TFF2Q03403 129 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 LRRC8DQ7L1W4 858 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 CCDC155Q8N6L0 562 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 KRT23Q9C075 422 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 PXMP2Q9NR77 195 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 HDAC6Q9UBN7 1215 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 GTF2IRD1Q9UHL9 959 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 TTC28Q96AY4 2481 aa19.07■□□□□ 0.64
LIG1-205ENST00000593425 HIP1O00291 1037 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 PPP1R11O60927 126 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 NR3C2P08235 984 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 ZNF286BP0CG31 522 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 POU3F3P20264 500 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 HSD17B4P51659 736 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 WDR5P61964 334 aaKnown RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 SEC23AQ15436 765 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 DGKDQ16760 1214 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 TMCO2Q7Z6W1 182 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 ARNTL2Q8WYA1 636 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 EMID1Q96A84 441 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 NECAB3Q96P71 396 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 ALG1Q9BT22 464 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 TSPYL2Q9H2G4 693 aaPredicted RBP19.06■□□□□ 0.64
LIG1-205ENST00000593425 MRVI1Q9Y6F6 885 aa19.06■□□□□ 0.64
LIG1-205ENST00000593425 GTPBP6O43824 516 aaPredicted RBP19.05■□□□□ 0.64
LIG1-205ENST00000593425 EIF3JO75822 258 aaKnown RBP19.05■□□□□ 0.64
LIG1-205ENST00000593425 SELPP16109 830 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 PSEN2P49810 448 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 GHRHRQ02643 423 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 RBL2Q08999 1139 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 SKIV2LQ15477 1246 aaKnown RBP19.05■□□□□ 0.64
LIG1-205ENST00000593425 TCTN1Q2MV58 587 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 IFIT1BQ5T764 474 aaKnown RBP19.05■□□□□ 0.64
LIG1-205ENST00000593425 CYB5R4Q7L1T6 521 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 IL27Q8NEV9 243 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 EXOC6Q8TAG9 804 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 MTMR8Q96EF0 704 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 UBAC1Q9BSL1 405 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 AMNQ9BXJ7 453 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 CTNNA3Q9UI47 895 aa19.05■□□□□ 0.64
LIG1-205ENST00000593425 PRRC2BQ5JSZ5 2229 aaKnown RBP19.04■□□□□ 0.64
LIG1-205ENST00000593425 LCHNA4D1U4 455 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 KIF28PB7ZC32 967 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 HAS3O00219 553 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 NBNO60934 754 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 RGS20O76081 388 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 F2P00734 622 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 CKBP12277 381 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 BMP1P13497 986 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 KCNJ6P48051 423 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 KCNQ1P51787 676 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 DEFB103AP81534 67 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 MFSD10Q14728 455 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 SLC35G1Q2M3R5 365 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 WNT8BQ93098 351 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 PDCD2LQ9BRP1 358 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 CNNM2Q9H8M5 875 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 MAD2L2Q9UI95 211 aa19.04■□□□□ 0.64
LIG1-205ENST00000593425 KLRF2D3W0D1 207 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 TLL1O43897 1013 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 SORBS3O60504 671 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 CXCL10P02778 98 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 MYCLP12524 364 aaPredicted RBP19.03■□□□□ 0.64
LIG1-205ENST00000593425 COL9A1P20849 921 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 LAMC2Q13753 1193 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 KIAA0753Q2KHM9 967 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 CNKSR3Q6P9H4 555 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 TRAF7Q6Q0C0 670 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 DHX37Q8IY37 1157 aaKnown RBP19.03■□□□□ 0.64
LIG1-205ENST00000593425 C7orf31Q8N865 590 aa19.03■□□□□ 0.64
LIG1-205ENST00000593425 IL31RAQ8NI17 732 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms