RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 CMTR1Q8N1G2 835 aaKnown RBP20.48■□□□□ 0.87
CIRBP-244ENST00000593283 DEFB123Q8N688 67 aa20.48■□□□□ 0.87
CIRBP-244ENST00000593283 AFG1LQ8WV93 481 aa20.48■□□□□ 0.87
CIRBP-244ENST00000593283 RNPC3Q96LT9 517 aaKnown RBP20.48■□□□□ 0.87
CIRBP-244ENST00000593283 ALDH8A1Q9H2A2 487 aaPredicted RBP20.48■□□□□ 0.87
CIRBP-244ENST00000593283 MRVI1Q9Y6F6 885 aa20.48■□□□□ 0.87
CIRBP-244ENST00000593283 UMODL1Q5DID0 1318 aa20.48■□□□□ 0.87
CIRBP-244ENST00000593283 RGS20O76081 388 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 MMP3P08254 477 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 CYP2C18P33260 490 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 TSGA10IPQ3SY00 556 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 TMTC3Q6ZXV5 915 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 PPP1R13LQ8WUF5 828 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 HIPK3Q9H422 1215 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 SCN5AQ14524 2016 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 FRMPD4Q14CM0 1322 aa20.47■□□□□ 0.87
CIRBP-244ENST00000593283 KPNA6O60684 536 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 CSF2RAP15509 400 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 CCND2P30279 289 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 EXOSC10Q01780 885 aaKnown RBP20.46■□□□□ 0.87
CIRBP-244ENST00000593283 PPIGQ13427 754 aaKnown RBP eCLIP20.46■□□□□ 0.873e-9■■■□□ 14.7
CIRBP-244ENST00000593283 KRT32Q14532 448 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 NBPF20Q3BBV1 942 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
CIRBP-244ENST00000593283 DHX32Q7L7V1 743 aaKnown RBP20.46■□□□□ 0.87
CIRBP-244ENST00000593283 NOC4LQ9BVI4 516 aaKnown RBP20.46■□□□□ 0.87
CIRBP-244ENST00000593283 TRMT13Q9NUP7 481 aaKnown RBP20.46■□□□□ 0.87
CIRBP-244ENST00000593283 DDX41Q9UJV9 622 aaKnown RBP20.46■□□□□ 0.87
CIRBP-244ENST00000593283 hCG_1642624A0A1W2PR95 340 aa20.45■□□□□ 0.86
CIRBP-244ENST00000593283 FAM47CQ5HY64 1035 aa20.45■□□□□ 0.86
CIRBP-244ENST00000593283 VSIG10LQ86VR7 867 aa20.45■□□□□ 0.86
CIRBP-244ENST00000593283 TMEM199Q8N511 208 aa20.45■□□□□ 0.86
CIRBP-244ENST00000593283 FANCBQ8NB91 859 aa20.45■□□□□ 0.86
CIRBP-244ENST00000593283 ZFP91Q96JP5 570 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-244ENST00000593283 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-244ENST00000593283 SYNE3Q6ZMZ3 975 aa20.44■□□□□ 0.86
CIRBP-244ENST00000593283 CCDC82Q8N4S0 544 aa20.44■□□□□ 0.86
CIRBP-244ENST00000593283 EMID1Q96A84 441 aaPredicted RBP20.44■□□□□ 0.86
CIRBP-244ENST00000593283 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.44■□□□□ 0.868e-8■□□□□ 11.1
CIRBP-244ENST00000593283 WNT8AQ9H1J5 351 aa20.44■□□□□ 0.86
CIRBP-244ENST00000593283 BRPF3Q9ULD4 1205 aa20.44■□□□□ 0.86
CIRBP-244ENST00000593283 CNTNAP5Q8WYK1 1306 aa20.44■□□□□ 0.86
CIRBP-244ENST00000593283 GBF1Q92538 1859 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 SORBS3O60504 671 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 CYP2C9P11712 490 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 UBA1P22314 1058 aaKnown RBP20.43■□□□□ 0.86
CIRBP-244ENST00000593283 CHMP4BP1P59074 171 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 NFRKBQ6P4R8 1299 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 USP17L6PQ6QN14 398 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 SMARCC2Q8TAQ2 1214 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
CIRBP-244ENST00000593283 KCNB2Q92953 911 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 CUL5Q93034 780 aa20.43■□□□□ 0.86
CIRBP-244ENST00000593283 MEIS2O14770 477 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 ACRP10323 421 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 CPA1P15085 419 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 HSPA4P34932 840 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 CCL23P55773 120 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 RTN1Q16799 776 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 TMEM240Q5SV17 173 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 C16orf59Q7L2K0 433 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 DHX37Q8IY37 1157 aaKnown RBP20.42■□□□□ 0.86
CIRBP-244ENST00000593283 PPTC7Q8NI37 304 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 MTMR10Q9NXD2 777 aa20.42■□□□□ 0.86
CIRBP-244ENST00000593283 KLF18A0A0U1RQI7 1052 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 PIK3CDO00329 1044 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 ZBTB43O43298 467 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 GGPS1O95749 300 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 HMGB1P09429 215 aaKnown RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 SUPT20HL2P0C7V6 817 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 ZNF286BP0CG31 522 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 MRPS9P82933 396 aaKnown RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 SMAD3P84022 425 aaKnown RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 LAMC2Q13753 1193 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 DGKDQ16760 1214 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 FAM109BQ6ICB4 259 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 PSRC1Q6PGN9 363 aaPredicted RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 KCNV1Q6PIU1 500 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 HEATR3Q7Z4Q2 680 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 KAT2BQ92831 832 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 IL23AQ9NPF7 189 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 RBM28Q9NW13 759 aaKnown RBP20.41■□□□□ 0.86
CIRBP-244ENST00000593283 SNX14Q9Y5W7 946 aa20.41■□□□□ 0.86
CIRBP-244ENST00000593283 GOLGA8AA7E2F4 631 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 GOLGA8BA8MQT2 603 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 REC8O95072 547 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 COL6A3P12111 3177 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 CASTP20810 708 aaKnown RBP20.4■□□□□ 0.86
CIRBP-244ENST00000593283 SP2Q02086 613 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 PTPN11Q06124 597 aaPredicted RBP20.4■□□□□ 0.86
CIRBP-244ENST00000593283 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
CIRBP-244ENST00000593283 ZNF697Q5TEC3 545 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 ZNF365Q70YC5 407 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 SPATA33Q96N06 139 aa20.4■□□□□ 0.86
CIRBP-244ENST00000593283 INPP4AQ96PE3 977 aaPredicted RBP20.4■□□□□ 0.86
CIRBP-244ENST00000593283 TET1Q8NFU7 2136 aa20.39■□□□□ 0.86
CIRBP-244ENST00000593283 HOXD8P13378 290 aaPredicted RBP20.39■□□□□ 0.85
CIRBP-244ENST00000593283 SEMA3FQ13275 785 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms