RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 NT5C3AQ9H0P0 336 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 SAMSN1Q9NSI8 373 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 PYCARDQ9ULZ3 195 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 SSC5DA1L4H1 1573 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 FLOT1O75955 427 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 PRCPP42785 496 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
NPC1-214ENST00000593280 DGKZQ13574 1117 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 MCM6Q14566 821 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 HYIQ5T013 277 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 CDKAL1Q5VV42 579 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 LRRC8AQ8IWT6 810 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
NPC1-214ENST00000593280 ERMNQ8TAM6 284 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 KIAA1524Q8TCG1 905 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
NPC1-214ENST00000593280 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 UIMC1Q96RL1 719 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
NPC1-214ENST00000593280 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
NPC1-214ENST00000593280 WDR90Q96KV7 1748 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 ZNF536O15090 1300 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 PTPRAP18433 802 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 PDE4DQ08499 809 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 SPP2Q13103 211 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 HAUS3Q68CZ6 603 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 ADSSL1Q8N142 457 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 ZNF280CQ8ND82 737 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 TBC1D5Q92609 795 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
NPC1-214ENST00000593280 SLC38A10Q9HBR0 1119 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 PPP1R9AQ9ULJ8 1098 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 CTDP1Q9Y5B0 961 aaPredicted RBP13.37□□□□□ -0.27
NPC1-214ENST00000593280 STK24Q9Y6E0 443 aa13.37□□□□□ -0.27
NPC1-214ENST00000593280 MYMKA6NI61 221 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 PSMA7O14818 248 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 MSH4O15457 936 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 STAT3P40763 770 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 PPP1R2P41236 205 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 BACE1P56817 501 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
NPC1-214ENST00000593280 NCAPH2Q6IBW4 605 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 CNNM4Q6P4Q7 775 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.36□□□□□ -0.27
NPC1-214ENST00000593280 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 C17orf53Q8N3J3 647 aaPredicted RBP13.36□□□□□ -0.27
NPC1-214ENST00000593280 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
NPC1-214ENST00000593280 INTS13Q9NVM9 706 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 PNMA2Q9UL42 364 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 MAPK8IP1Q9UQF2 711 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 PAPPA2Q9BXP8 1791 aa13.36□□□□□ -0.27
NPC1-214ENST00000593280 POLR2AP24928 1970 aaKnown RBP13.36□□□□□ -0.27
NPC1-214ENST00000593280 PVALEFA0A1B0GWK0 134 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ZBED4O75132 1171 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 DDNO94850 711 aaPredicted RBP13.35□□□□□ -0.27
NPC1-214ENST00000593280 HSD17B4P51659 736 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 SPAG1Q07617 926 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ARID5BQ14865 1188 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ECM1Q16610 540 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 NOL9Q5SY16 702 aaKnown RBP13.35□□□□□ -0.27
NPC1-214ENST00000593280 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 KCNK18Q7Z418 384 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 KLRG1Q96E93 195 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 DHTKD1Q96HY7 919 aaPredicted RBP13.35□□□□□ -0.27
NPC1-214ENST00000593280 CTAGE1Q96RT6 745 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 SYT17Q9BSW7 474 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 SPTLC3Q9NUV7 552 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 RABGAP1Q9Y3P9 1069 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 COL11A1P12107 1806 aaPredicted RBP13.35□□□□□ -0.27
NPC1-214ENST00000593280 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 IGLV3-22A0A075B6J6 115 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 POTECB2RU33 542 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 COBLO75128 1261 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 OFD1O75665 1012 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 FDX1P10109 184 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ALAS1P13196 640 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPC1-214ENST00000593280 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 C12orf42Q96LP6 360 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 RAVER2Q9HCJ3 691 aaKnown RBP13.35□□□□□ -0.27
NPC1-214ENST00000593280 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
NPC1-214ENST00000593280 RLFQ13129 1914 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 NFIBO00712 420 aa13.34□□□□□ -0.27
NPC1-214ENST00000593280 NRDCO43847 1150 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms