RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 ZBBXA8MT70 800 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 DYNC1LI2O43237 492 aaPredicted RBP15.37■□□□□ 0.05
H3F3B-213ENST00000593254 GTPBP6O43824 516 aaPredicted RBP15.37■□□□□ 0.05
H3F3B-213ENST00000593254 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
H3F3B-213ENST00000593254 GPR37L1O60883 481 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 CA3P07451 260 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 PFKMP08237 780 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 TTLL4Q14679 1199 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 DUSP28Q4G0W2 176 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 RALYLQ86SE5 291 aaKnown RBP15.37■□□□□ 0.05
H3F3B-213ENST00000593254 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 SCLYQ96I15 445 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 AP5M1Q9H0R1 490 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 MAD2L2Q9UI95 211 aa15.37■□□□□ 0.05
H3F3B-213ENST00000593254 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
H3F3B-213ENST00000593254 PALM3A6NDB9 673 aaPredicted RBP15.36■□□□□ 0.05
H3F3B-213ENST00000593254 KLRF2D3W0D1 207 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
H3F3B-213ENST00000593254 PDE4DQ08499 809 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 KRT40Q6A162 431 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 CENPQQ7L2Z9 268 aaPredicted RBP15.36■□□□□ 0.05
H3F3B-213ENST00000593254 TBC1D5Q92609 795 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 KHSRPQ92945 711 aaKnown RBP eCLIP15.36■□□□□ 0.052e-30■□□□□ 8.9
H3F3B-213ENST00000593254 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 MPHOSPH6Q99547 160 aaKnown RBP15.36■□□□□ 0.05
H3F3B-213ENST00000593254 WDR11Q9BZH6 1224 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 ALDH8A1Q9H2A2 487 aaPredicted RBP15.36■□□□□ 0.05
H3F3B-213ENST00000593254 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 VAT1LQ9HCJ6 419 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 TRIOO75962 3097 aa15.36■□□□□ 0.05
H3F3B-213ENST00000593254 ERICH2A1L162 156 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 ZEB2O60315 1214 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 ANTXR2P58335 489 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 PSMC6P62333 389 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 TROAPQ12815 778 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 GRM4Q14833 912 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 WTAPQ15007 396 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
H3F3B-213ENST00000593254 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
H3F3B-213ENST00000593254 SYTL5Q8TDW5 730 aaPredicted RBP15.35■□□□□ 0.05
H3F3B-213ENST00000593254 ESYT1Q9BSJ8 1104 aa15.35■□□□□ 0.05
H3F3B-213ENST00000593254 LSG1Q9H089 658 aaKnown RBP15.35■□□□□ 0.05
H3F3B-213ENST00000593254 MRPL11Q9Y3B7 192 aaKnown RBP15.35■□□□□ 0.05
H3F3B-213ENST00000593254 B4DLN1 442 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 ZBTB5O15062 677 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 MRPL12P52815 198 aaKnown RBP15.34■□□□□ 0.05
H3F3B-213ENST00000593254 GHRHRQ02643 423 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 SLC35G1Q2M3R5 365 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 CHST3Q7LGC8 479 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 IGDCC4Q8TDY8 1250 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 SCFD2Q8WU76 684 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 HLA-CQ95604 372 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 AMNQ9BXJ7 453 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 CERS4Q9HA82 394 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 COL20A1Q9P218 1284 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 PTPRSQ13332 1948 aa15.34■□□□□ 0.05
H3F3B-213ENST00000593254 TANC1Q9C0D5 1861 aa15.33■□□□□ 0.05
H3F3B-213ENST00000593254 COL4A4P53420 1690 aaPredicted RBP15.33■□□□□ 0.04
H3F3B-213ENST00000593254 OPLAHO14841 1288 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 NKRFO15226 690 aaKnown RBP eCLIP15.33■□□□□ 0.043e-7■■□□□ 11.7
H3F3B-213ENST00000593254 PPP1R11O60927 126 aaPredicted RBP15.33■□□□□ 0.04
H3F3B-213ENST00000593254 TAP1Q03518 808 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 PPP2R5BQ15173 497 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 SKAP1Q86WV1 359 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 PHOSPHO2Q8TCD6 241 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 NSUN6Q8TEA1 469 aaKnown RBP15.33■□□□□ 0.04
H3F3B-213ENST00000593254 TAAR1Q96RJ0 339 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 SLC9A7Q96T83 725 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 RIOX1Q9H6W3 641 aa15.33■□□□□ 0.04
H3F3B-213ENST00000593254 TRMT13Q9NUP7 481 aaKnown RBP15.33■□□□□ 0.04
H3F3B-213ENST00000593254 PI4K2BG5E9Z4 385 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 LPXNO60711 386 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 SUPT20HL2P0C7V6 817 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 CYP2C9P11712 490 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 CPT1AP50416 773 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 HSD17B4P51659 736 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 DEFB128Q7Z7B8 93 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 ARNTL2Q8WYA1 636 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 IWS1Q96ST2 819 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 RMDN3Q96TC7 470 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 MTA3Q9BTC8 594 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 MYH7BA7E2Y1 1941 aa15.32■□□□□ 0.04
H3F3B-213ENST00000593254 TRIP12Q14669 1992 aaPredicted RBP15.31■□□□□ 0.04
H3F3B-213ENST00000593254 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 FAM86C2PA6NEL3 165 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 CYTH3O43739 400 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 ARIH2O95376 493 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 CFBP00751 764 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 TXNP10599 105 aaKnown RBP15.31■□□□□ 0.04
H3F3B-213ENST00000593254 PURAQ00577 322 aaKnown RBP15.31■□□□□ 0.04
H3F3B-213ENST00000593254 GRB10Q13322 594 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 OR6J1Q8NGC5 347 aa15.31■□□□□ 0.04
H3F3B-213ENST00000593254 PIGSQ96S52 555 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms