RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 IGFBP4P22692 258 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 CHMLP26374 656 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 RFC2P35250 354 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 HSD17B4P51659 736 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 IRX6P78412 446 aaPredicted RBP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 BFSP2Q13515 415 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 ADGRE1Q14246 886 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PTGISQ16647 500 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PPP2R2DQ66LE6 453 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 MTMR8Q96EF0 704 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 FTOQ9C0B1 505 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PRDM6Q9NQX0 595 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 DDX41Q9UJV9 622 aaKnown RBP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PCDHA11Q9Y5I1 949 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 PCDHA1Q9Y5I3 950 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 MRVI1Q9Y6F6 885 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 U3KPZ7 1027 aaPredicted RBP23.8■■□□□ 1.4
TRIM47-207ENST00000593089 MYH7BA7E2Y1 1941 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 VCANP13611 3396 aa23.8■■□□□ 1.4
TRIM47-207ENST00000593089 IFIT3O14879 490 aaKnown RBP23.79■■□□□ 1.4
TRIM47-207ENST00000593089 MYCLP12524 364 aaPredicted RBP23.79■■□□□ 1.4
TRIM47-207ENST00000593089 ACTN1P12814 892 aa23.79■■□□□ 1.4
TRIM47-207ENST00000593089 KAT2BQ92831 832 aa23.79■■□□□ 1.4
TRIM47-207ENST00000593089 TRIP12Q14669 1992 aaPredicted RBP23.79■■□□□ 1.4
TRIM47-207ENST00000593089 ERICH2A1L162 156 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 HOXA13P31271 388 aaPredicted RBP23.78■■□□□ 1.4
TRIM47-207ENST00000593089 GRM4Q14833 912 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 CCDC85BQ15834 202 aaPredicted RBP23.78■■□□□ 1.4
TRIM47-207ENST00000593089 DGKDQ16760 1214 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 GDF6Q6KF10 455 aaPredicted RBP23.78■■□□□ 1.4
TRIM47-207ENST00000593089 RALYLQ86SE5 291 aaKnown RBP23.78■■□□□ 1.4
TRIM47-207ENST00000593089 PIGSQ96S52 555 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 SENP2Q9HC62 589 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 TAF6LQ9Y6J9 622 aa23.78■■□□□ 1.4
TRIM47-207ENST00000593089 GHRHRQ02643 423 aa23.77■■□□□ 1.4
TRIM47-207ENST00000593089 SLC35G1Q2M3R5 365 aa23.77■■□□□ 1.4
TRIM47-207ENST00000593089 DHX37Q8IY37 1157 aaKnown RBP23.77■■□□□ 1.4
TRIM47-207ENST00000593089 CCDC155Q8N6L0 562 aa23.77■■□□□ 1.4
TRIM47-207ENST00000593089 PDCD2LQ9BRP1 358 aa23.77■■□□□ 1.4
TRIM47-207ENST00000593089 E7EWF7 191 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 SORBS3O60504 671 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 LAMC2Q13753 1193 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 WTAPQ15007 396 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 SESTD1Q86VW0 696 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 NCOA7Q8NI08 942 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 SYMPKQ92797 1274 aaKnown RBP23.76■■□□□ 1.39
TRIM47-207ENST00000593089 EMID1Q96A84 441 aaPredicted RBP23.76■■□□□ 1.39
TRIM47-207ENST00000593089 CTAGE1Q96RT6 745 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 ALG1Q9BT22 464 aa23.76■■□□□ 1.39
TRIM47-207ENST00000593089 MAP3K20Q9NYL2 800 aaKnown RBP23.76■■□□□ 1.39
TRIM47-207ENST00000593089 BAZ2BQ9UIF8 2168 aaKnown RBP23.76■■□□□ 1.39
TRIM47-207ENST00000593089 CHD9Q3L8U1 2897 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 ZNF286BP0CG31 522 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 PSEN2P49810 448 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 PGM5Q15124 567 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 TMEM67Q5HYA8 995 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 TJAP1Q5JTD0 557 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 STOX1Q6ZVD7 989 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 C7orf31Q8N865 590 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 CAGE1Q8TC20 777 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 ZFP91Q96JP5 570 aaPredicted RBP23.75■■□□□ 1.39
TRIM47-207ENST00000593089 SLC9A7Q96T83 725 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 RIOX1Q9H6W3 641 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 HDAC6Q9UBN7 1215 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 TET1Q8NFU7 2136 aa23.75■■□□□ 1.39
TRIM47-207ENST00000593089 RGS20O76081 388 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 CA3P07451 260 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 SART3Q15020 963 aaKnown RBP23.74■■□□□ 1.39
TRIM47-207ENST00000593089 IL31RAQ8NI17 732 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 PPTC7Q8NI37 304 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 AFAP1L1Q8TED9 768 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 DHX38Q92620 1227 aaKnown RBP23.74■■□□□ 1.39
TRIM47-207ENST00000593089 KATNAL1Q9BW62 490 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 GTF2IRD1Q9UHL9 959 aa23.74■■□□□ 1.39
TRIM47-207ENST00000593089 GCOM1H8Y6P7 765 aaPredicted RBP23.73■■□□□ 1.39
TRIM47-207ENST00000593089 SGSM2O43147 1006 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 CYTH3O43739 400 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 POLR2MP0CAP2 368 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 TRAF1Q13077 416 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 MFSD10Q14728 455 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 KIAA0753Q2KHM9 967 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 VSIG10LQ86VR7 867 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 FCHSD1Q86WN1 690 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 SAMD3Q8N6K7 520 aa23.73■■□□□ 1.39
TRIM47-207ENST00000593089 SPTBN5Q9NRC6 3674 aaKnown RBP23.72■■□□□ 1.39
TRIM47-207ENST00000593089 PNMA6FA0A0J9YX94 578 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 SELPP16109 830 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 CCND2P30279 289 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 TROAPQ12815 778 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 MYSM1Q5VVJ2 828 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 KCNV1Q6PIU1 500 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 LRRC8DQ7L1W4 858 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 MICALL1Q8N3F8 863 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 PHOSPHO2Q8TCD6 241 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 PIBF1Q8WXW3 757 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 CERS4Q9HA82 394 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 THEGQ9P2T0 379 aa23.72■■□□□ 1.39
TRIM47-207ENST00000593089 GGPS1O95749 300 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 F2P00734 622 aa23.71■■□□□ 1.39
TRIM47-207ENST00000593089 ANTXR2P58335 489 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms