RNA–Protein interactions for RNA: ENST00000592905.5

ERCC1-217, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 882 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-217ENST00000592905 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
ERCC1-217ENST00000592905 TSEN34Q9BSV6 310 aaKnown RBP17.41■□□□□ 0.38
ERCC1-217ENST00000592905 ALDH8A1Q9H2A2 487 aaPredicted RBP17.41■□□□□ 0.38
ERCC1-217ENST00000592905 BARHL2Q9NY43 387 aa17.41■□□□□ 0.38
ERCC1-217ENST00000592905 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
ERCC1-217ENST00000592905 DOCK5Q9H7D0 1870 aa17.41■□□□□ 0.38
ERCC1-217ENST00000592905 CPLX1O14810 134 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 SORBS3O60504 671 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 RGS20O76081 388 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 CST5P28325 142 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-217ENST00000592905 RTP1P59025 263 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 MRPS9P82933 396 aaKnown RBP17.4■□□□□ 0.38
ERCC1-217ENST00000592905 SCRN1Q12765 414 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 CCDC62Q6P9F0 684 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 VTI1AQ96AJ9 217 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
ERCC1-217ENST00000592905 ATP11BQ9Y2G3 1177 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 Q9Y3F1 56 aa17.4■□□□□ 0.38
ERCC1-217ENST00000592905 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 SYN1P17600 705 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 ADCY7P51828 1080 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 SSRP1Q08945 709 aaKnown RBP17.39■□□□□ 0.37
ERCC1-217ENST00000592905 PRPF38BQ5VTL8 546 aaKnown RBP17.39■□□□□ 0.37
ERCC1-217ENST00000592905 CXCL17Q6UXB2 119 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 NECAB1Q8N987 351 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 PCSK9Q8NBP7 692 aaKnown RBP17.39■□□□□ 0.37
ERCC1-217ENST00000592905 RNF26Q9BY78 433 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-217ENST00000592905 SLKQ9H2G2 1235 aaPredicted RBP17.39■□□□□ 0.37
ERCC1-217ENST00000592905 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 PCDHA6Q9UN73 950 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 PCDHA8Q9Y5H6 950 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 NR2E3Q9Y5X4 410 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 MRVI1Q9Y6F6 885 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 FRMPD4Q14CM0 1322 aa17.39■□□□□ 0.37
ERCC1-217ENST00000592905 MOXD2PA6NHM9 499 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 LARGE1O95461 756 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 NKX3-2P78367 333 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 ANKRD1Q15327 319 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 TRIM60Q495X7 471 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 KIF2CQ99661 725 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 STARD7Q9NQZ5 370 aa17.38■□□□□ 0.37
ERCC1-217ENST00000592905 DDX41Q9UJV9 622 aaKnown RBP17.38■□□□□ 0.37
ERCC1-217ENST00000592905 SPDYE3A6NKU9 549 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 hCG_1984214I3L0E3 225 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
ERCC1-217ENST00000592905 PFKFB2O60825 505 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 MYL3P08590 195 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 SP2Q02086 613 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 ME3Q16798 604 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 ZNF713Q8N859 430 aaPredicted RBP17.37■□□□□ 0.37
ERCC1-217ENST00000592905 GLT1D1Q96MS3 346 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 BCAS3Q9H6U6 928 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
ERCC1-217ENST00000592905 ZEB2O60315 1214 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 GH1P01241 217 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 PSMC6P62333 389 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 TLE2Q04725 743 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 PCNX4Q63HM2 1172 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 PPP1R13LQ8WUF5 828 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
ERCC1-217ENST00000592905 RBM27Q9P2N5 1060 aaKnown RBP17.36■□□□□ 0.37
ERCC1-217ENST00000592905 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
ERCC1-217ENST00000592905 CPT1AP50416 773 aa17.35■□□□□ 0.37
ERCC1-217ENST00000592905 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
ERCC1-217ENST00000592905 SNX17Q15036 470 aa17.35■□□□□ 0.37
ERCC1-217ENST00000592905 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
ERCC1-217ENST00000592905 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
ERCC1-217ENST00000592905 C6orf50Q9HD87 102 aa17.35■□□□□ 0.37
ERCC1-217ENST00000592905 A6NJR5 290 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 ELP1O95163 1332 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 GGPS1O95749 300 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
ERCC1-217ENST00000592905 CLK2P49760 499 aaKnown RBP17.34■□□□□ 0.37
ERCC1-217ENST00000592905 CHMP4BP1P59074 171 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 SH3RF1Q7Z6J0 888 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 RASGRP4Q8TDF6 673 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 INPP4AQ96PE3 977 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-217ENST00000592905 ANO3Q9BYT9 981 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
ERCC1-217ENST00000592905 PRDM5Q9NQX1 630 aaPredicted RBP17.34■□□□□ 0.37
ERCC1-217ENST00000592905 GRIN2DO15399 1336 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-217ENST00000592905 SPATA31C2B4DYI2 1134 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 DEXIO95424 95 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
ERCC1-217ENST00000592905 PURAQ00577 322 aaKnown RBP17.33■□□□□ 0.36
ERCC1-217ENST00000592905 GNPTABQ3T906 1256 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 BRDTQ58F21 947 aaPredicted RBP17.33■□□□□ 0.36
ERCC1-217ENST00000592905 C1orf53Q5VUE5 145 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 XRRA1Q6P2D8 792 aa17.33■□□□□ 0.36
ERCC1-217ENST00000592905 KCNV1Q6PIU1 500 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms