RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ZHX2Q9Y6X8 837 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 LMTK2Q8IWU2 1503 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 FRMPD2Q68DX3 1309 aaPredicted RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 GAS8O95995 478 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 ARID5BQ14865 1188 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 RC3H1Q5TC82 1133 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 LARP4BQ92615 738 aaKnown RBP13.92□□□□□ -0.18
DNMT1-228ENST00000592705 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
DNMT1-228ENST00000592705 SPATA31A5Q5VU36 1347 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 SPATA31A7Q8IWB4 1347 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 USP42Q9H9J4 1324 aaKnown RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 PRKAB2O43741 272 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 YY1P25490 414 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 NAA25Q14CX7 972 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 STMN2Q93045 179 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 EXOC4Q96A65 974 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 AIFM3Q96NN9 605 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 PIH1D3Q9NQM4 214 aaKnown RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 N4BP1O75113 896 aaKnown RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 COBLO75128 1261 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 EPHB4P54760 987 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 Q3C1V9 767 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 AMNQ9BXJ7 453 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 RIC8AQ9NPQ8 531 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 BUB1BO60566 1050 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 GBP1P32455 592 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 SREBF2Q12772 1141 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 MAEAQ7L5Y9 396 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 SPATA24Q86W54 205 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 HOXC10Q9NYD6 342 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 COL4A3BPQ9Y5P4 624 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 FOSP01100 380 aaPredicted RBP13.91□□□□□ -0.18
DNMT1-228ENST00000592705 P4HA1P13674 534 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 RASSF7Q02833 373 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
DNMT1-228ENST00000592705 hCG_1984214I3L0E3 225 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 LMNB1P20700 586 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ZBED6P86452 979 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 UAP1Q16222 522 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 CCDC14Q49A88 953 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 PRR16Q569H4 304 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 TBC1D9BQ66K14 1250 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ZNF713Q8N859 430 aaPredicted RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 RNF14Q9UBS8 474 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 NRKQ7Z2Y5 1582 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 KDM4FA0A1W2PPD8 638 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 H0YCG3 227 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 CIB2O75838 187 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ARL6IP4Q66PJ3 421 aaKnown RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 STK17AQ9UEE5 414 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 VSIG1Q86XK7 387 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 SP8Q8IXZ3 490 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 CNOT7Q9UIV1 285 aaKnown RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 FAM184BQ9ULE4 1060 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 CAPN7Q9Y6W3 813 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 MFAP3LO75121 409 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 NDUFA10O95299 355 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 KRT19P08727 400 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ABCB4P21439 1286 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 PTPREP23469 700 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 NT5C2P49902 561 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 ATP1A2P50993 1020 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 GUCY2DQ02846 1103 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 HHATQ5VTY9 493 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 FAM160B2Q86V87 743 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 STRBPQ96SI9 672 aaKnown RBP13.9□□□□□ -0.18
DNMT1-228ENST00000592705 FAM169AQ9Y6X4 670 aa13.9□□□□□ -0.18
DNMT1-228ENST00000592705 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-228ENST00000592705 BMP3P12645 472 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 ATF7P17544 494 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-228ENST00000592705 TFDP1Q14186 410 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 HOMER3Q9NSC5 361 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 PCDHA1Q9Y5I3 950 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 RNF40O75150 1001 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 TTLL1O95922 423 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 CCNE1P24864 410 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 CYP2J2P51589 502 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
DNMT1-228ENST00000592705 AXIN2Q9Y2T1 843 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 PRPF6O94906 941 aaKnown RBP13.89□□□□□ -0.19
DNMT1-228ENST00000592705 VEGFAP15692 232 aaPredicted RBP13.89□□□□□ -0.19
DNMT1-228ENST00000592705 CRKP46108 304 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 ASPRV1Q53RT3 343 aa13.89□□□□□ -0.19
DNMT1-228ENST00000592705 MICALL2Q8IY33 904 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms