RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 ERCC3P19447 782 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 GTF3C2Q8WUA4 911 aaPredicted RBP25.72■■□□□ 1.71
SPHK1-210ENST00000592299 LENG9Q96B70 501 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 AK8Q96MA6 479 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 RAB34Q9BZG1 259 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 PXMP2Q9NR77 195 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 PCDHA12Q9UN75 941 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 UBA7P41226 1012 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 LONRF3Q496Y0 759 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 CEP55Q53EZ4 464 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 SLFN12Q8IYM2 578 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 IL31RAQ8NI17 732 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 TIGD1Q96MW7 591 aa25.72■■□□□ 1.71
SPHK1-210ENST00000592299 CTAGE5O15320 804 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 FXR2P51116 673 aaKnown RBP eCLIP25.71■■□□□ 1.71
SPHK1-210ENST00000592299 ERVK-9P63128 1117 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 ERVK-24P63145 666 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 PLA2G4DQ86XP0 818 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 CNNM3Q8NE01 707 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 RASSF8Q8NHQ8 419 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 MAF1Q9H063 256 aa25.71■■□□□ 1.71
SPHK1-210ENST00000592299 IGLV3-22A0A075B6J6 115 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 A0A087X0B3 334 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 TMEM88BA6NKF7 163 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 TBX3O15119 743 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 PGM5Q15124 567 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 PCNX4Q63HM2 1172 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 IGSF22Q8N9C0 903 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 ETNPPLQ8TBG4 499 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 DHX58Q96C10 678 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 LRWD1Q9UFC0 647 aa25.7■■□□□ 1.71
SPHK1-210ENST00000592299 MANSC4A6NHS7 340 aaPredicted RBP25.7■■□□□ 1.7
SPHK1-210ENST00000592299 MYCLP12524 364 aaPredicted RBP25.7■■□□□ 1.7
SPHK1-210ENST00000592299 COPB2P35606 906 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 ZRSR1Q15695 479 aaKnown RBP25.7■■□□□ 1.7
SPHK1-210ENST00000592299 WDR78Q5VTH9 848 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 LRSAM1Q6UWE0 723 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 KRBA2Q6ZNG9 492 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 ANKRD13CQ8N6S4 541 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 PDCD2LQ9BRP1 358 aa25.7■■□□□ 1.7
SPHK1-210ENST00000592299 PFASO15067 1338 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 FRMPD4Q14CM0 1322 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 POTEMA6NI47 508 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 MSH4O15457 936 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 SLC10A3P09131 477 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 NSUN6Q8TEA1 469 aaKnown RBP25.69■■□□□ 1.7
SPHK1-210ENST00000592299 FAM20AQ96MK3 541 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 PARK7Q99497 189 aaKnown RBP25.69■■□□□ 1.7
SPHK1-210ENST00000592299 MXRA8Q9BRK3 442 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 SERTAD1Q9UHV2 236 aa25.69■■□□□ 1.7
SPHK1-210ENST00000592299 TESPA1A2RU30 521 aaPredicted RBP25.68■■□□□ 1.7
SPHK1-210ENST00000592299 PDIA5Q14554 519 aa25.68■■□□□ 1.7
SPHK1-210ENST00000592299 KARSQ15046 597 aaKnown RBP25.68■■□□□ 1.7
SPHK1-210ENST00000592299 CABP7Q86V35 215 aa25.68■■□□□ 1.7
SPHK1-210ENST00000592299 GPRC5AQ8NFJ5 357 aa25.68■■□□□ 1.7
SPHK1-210ENST00000592299 R3HDMLQ9H3Y0 253 aa25.68■■□□□ 1.7
SPHK1-210ENST00000592299 GCLCP48506 637 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 SETQ01105 290 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 RBM43Q6ZSC3 357 aaKnown RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 ERCC4Q92889 916 aaPredicted RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 CCSER1Q9C0I3 900 aa25.67■■□□□ 1.7
SPHK1-210ENST00000592299 MEIS1O00470 390 aa25.67■■□□□ 1.7
SPHK1-210ENST00000592299 MRPS9P82933 396 aaKnown RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 IQUBQ8NA54 791 aa25.67■■□□□ 1.7
SPHK1-210ENST00000592299 CCDC102AQ96A19 550 aa25.67■■□□□ 1.7
SPHK1-210ENST00000592299 PYM1Q9BRP8 204 aaKnown RBP25.67■■□□□ 1.7
SPHK1-210ENST00000592299 CCDC39Q9UFE4 941 aa25.67■■□□□ 1.7
SPHK1-210ENST00000592299 NR3C2P08235 984 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 ITGB5P18084 799 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 YY1P25490 414 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 CCNA1P78396 465 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 GRM1Q13255 1194 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 PAXIP1Q6ZW49 1069 aaPredicted RBP25.66■■□□□ 1.7
SPHK1-210ENST00000592299 CEP57L1Q8IYX8 460 aa25.66■■□□□ 1.7
SPHK1-210ENST00000592299 ACTN4O43707 911 aaKnown RBP25.65■■□□□ 1.7
SPHK1-210ENST00000592299 ARP10275 920 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 CCND2P30279 289 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 CNTN2Q02246 1040 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 GAS2L3Q86XJ1 694 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 PLIN2Q99541 437 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 WDR11Q9BZH6 1224 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 MROH8Q9H579 483 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 DISC1Q9NRI5 854 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 POTEB2H3BUK9 544 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 IGF2BP3O00425 579 aaKnown RBP eCLIP25.65■■□□□ 1.73e-6■□□□□ 11.2
SPHK1-210ENST00000592299 RRAGBQ5VZM2 374 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 CCDC34Q96HJ3 373 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 ZNF577Q9BSK1 485 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 PORCNQ9H237 461 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 HOOK1Q9UJC3 728 aaKnown RBP25.65■■□□□ 1.7
SPHK1-210ENST00000592299 UBIAD1Q9Y5Z9 338 aa25.65■■□□□ 1.7
SPHK1-210ENST00000592299 FAM155AB1AL88 458 aaPredicted RBP25.64■■□□□ 1.7
SPHK1-210ENST00000592299 SLFN14P0C7P3 912 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 STAT6P42226 847 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 KCTD2Q14681 263 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 KRT79Q5XKE5 535 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 KANK3Q6NY19 840 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 SASS6Q6UVJ0 657 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 SHCBP1Q8NEM2 672 aa25.64■■□□□ 1.7
SPHK1-210ENST00000592299 DNERQ8NFT8 737 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms