RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SLC26A6Q9BXS9 759 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 AGXT2Q9BYV1 514 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 GLT8D2Q9H1C3 349 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 SLKQ9H2G2 1235 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 UPF2Q9HAU5 1272 aaKnown RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 FAM217BQ9NTX9 383 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-227ENST00000591849 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
BRCA1-227ENST00000591849 A0A0U1RQG5 324 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 SMCO2A6NFE2 343 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 PRPF3O43395 683 aaKnown RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 PQBP1O60828 265 aaKnown RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 SCG2P13521 617 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 TLE2Q04725 743 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 TOB2Q14106 344 aaPredicted RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 UBE2SQ16763 222 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 TRIM60Q495X7 471 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 TMEM63BQ5T3F8 832 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 CXCL17Q6UXB2 119 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 NLRX1Q86UT6 975 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 VSIG10LQ86VR7 867 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 DHX37Q8IY37 1157 aaKnown RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 COPS5Q92905 334 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 PHKBQ93100 1093 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 NCOA5Q9HCD5 579 aaKnown RBP11.56□□□□□ -0.56
BRCA1-227ENST00000591849 C6orf50Q9HD87 102 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 RTEL1Q9NZ71 1219 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 PLXNA1Q9UIW2 1896 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 ELP1O95163 1332 aa11.56□□□□□ -0.56
BRCA1-227ENST00000591849 BAZ2BQ9UIF8 2168 aaKnown RBP11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 MEIS2O14770 477 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 KPNA6O60684 536 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PPFIA3O75145 1194 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 STAM2O75886 525 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 SEC24BO95487 1268 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 FOSP01100 380 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PTGS1P23219 599 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 NEK4P51957 841 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 FUT2Q10981 343 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 LAMC2Q13753 1193 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PFKFB3Q16875 520 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-227ENST00000591849 CCSAPQ6IQ19 270 aaPredicted RBP11.55□□□□□ -0.56
BRCA1-227ENST00000591849 XRRA1Q6P2D8 792 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 BARHL2Q9NY43 387 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PCDHA6Q9UN73 950 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 PCDHA8Q9Y5H6 950 aa11.55□□□□□ -0.56
BRCA1-227ENST00000591849 SMCHD1A6NHR9 2005 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 A0A1W2PPC1 479 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 STXBP3O00186 592 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 ARVCFO00192 962 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 SORBS3O60504 671 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 CDKL5O76039 1030 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 ARIH2O95376 493 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 TGFB3P10600 412 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 IFNAR1P17181 557 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 GNA11P29992 359 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 ZNF76P36508 570 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 EVCP57679 992 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 NLRP5P59047 1200 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 NKX3-2P78367 333 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 CCDC62Q6P9F0 684 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 CCDC148Q8NFR7 591 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 IL31RAQ8NI17 732 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 AFG1LQ8WV93 481 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 MTG1Q9BT17 334 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-227ENST00000591849 RNF26Q9BY78 433 aaPredicted RBP11.54□□□□□ -0.56
BRCA1-227ENST00000591849 PRO3102Q9H379 93 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 TMEM39AQ9NV64 488 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 DDX41Q9UJV9 622 aaKnown RBP11.54□□□□□ -0.56
BRCA1-227ENST00000591849 MROH7Q68CQ1 1323 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 COL6A3P12111 3177 aa11.54□□□□□ -0.56
BRCA1-227ENST00000591849 CTAGE5O15320 804 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 FIBPO43427 364 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 GGPS1O95749 300 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 CLTBP09497 229 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 AK2P54819 239 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 PSMC6P62333 389 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 ITGA7Q13683 1181 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 DGKDQ16760 1214 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 FAM47CQ5HY64 1035 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 JAKMIP3Q5VZ66 844 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 MCTP2Q6DN12 878 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 TEX2Q8IWB9 1127 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 SPATA33Q96N06 139 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 SEZ6LQ9BYH1 1024 aa11.53□□□□□ -0.56
BRCA1-227ENST00000591849 ALDH8A1Q9H2A2 487 aaPredicted RBP11.53□□□□□ -0.56
BRCA1-227ENST00000591849 A6NJR5 290 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.57
BRCA1-227ENST00000591849 DEXIO95424 95 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 RAG1P15918 1043 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms