RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	LY6K	Q17RY6	165 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	BRDT	Q58F21	947 aa	Predicted RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	UPF3B	Q9BZI7	483 aa	Known RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	PDLIM7	Q9NR12	457 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	POLR3E	Q9NVU0	708 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	FRMPD4	Q14CM0	1322 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	NID2	Q14112	1375 aa		18.89	■□□□□ 0.61
CIRBP-233	ENST00000591622	CEP290	O15078	2479 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622		A6NJR5	290 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	DCDC2C	A8MYV0	355 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	ARVCF	O00192	962 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	RGS20	O76081	388 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	GH1	P01241	217 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	CLTB	P09497	229 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	TOB2	Q14106	344 aa	Predicted RBP	18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	WWC2	Q6AWC2	1192 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	DDX41	Q9UJV9	622 aa	Known RBP	18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	MRVI1	Q9Y6F6	885 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	MROH7	Q68CQ1	1323 aa		18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.88	■□□□□ 0.61
CIRBP-233	ENST00000591622	TRIM43B	A6NCK2	446 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	hCG_1984214	I3L0E3	225 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	PDIA3	P30101	505 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	ANAPC15	P60006	121 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	PURA	Q00577	322 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	MDM2	Q00987	491 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	ARHGAP1	Q07960	439 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	FAAP100	Q0VG06	881 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	KCNV1	Q6PIU1	500 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	SH3RF1	Q7Z6J0	888 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	ZNF713	Q8N859	430 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	SLC43A3	Q8NBI5	491 aa		18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	RANBP2	P49792	3224 aa	Known RBP	18.87	■□□□□ 0.61
CIRBP-233	ENST00000591622	GRIN2D	O15399	1336 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622		A0A1W2PPC1	479 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	KPNA6	O60684	536 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	STAM2	O75886	525 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	MYL3	P08590	195 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	MRPS9	P82933	396 aa	Known RBP	18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	ITGA7	Q13683	1181 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	TYW1B	Q6NUM6	668 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	PPP1R18	Q6NYC8	613 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	ZFP91	Q96JP5	570 aa	Predicted RBP	18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	SEZ6L	Q9BYH1	1024 aa		18.86	■□□□□ 0.61
CIRBP-233	ENST00000591622	STXBP3	O00186	592 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	KIAA0355	O15063	1070 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	TGFB3	P10600	412 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	NAPA	P54920	295 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	PSMC6	P62333	389 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	UBE2S	Q16763	222 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	PCNX4	Q63HM2	1172 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	XRRA1	Q6P2D8	792 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	TEX2	Q8IWB9	1127 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	AFG1L	Q8WV93	481 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	EMID1	Q96A84	441 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	MTG1	Q9BT17	334 aa	Predicted RBP	18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	UBE2O	Q9C0C9	1292 aa	Known RBP	18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	PDRG1	Q9NUG6	133 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	TMEM39A	Q9NV64	488 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	BARHL2	Q9NY43	387 aa		18.85	■□□□□ 0.61
CIRBP-233	ENST00000591622	SPDYE3	A6NKU9	549 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	PRPF3	O43395	683 aa	Known RBP	18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	LAMC2	Q13753	1193 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	NTRK3	Q16288	839 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	PFKFB3	Q16875	520 aa	Predicted RBP	18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	GNPTAB	Q3T906	1256 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	FAM126B	Q8IXS8	530 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	DHX37	Q8IY37	1157 aa	Known RBP	18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	ZNF274	Q96GC6	653 aa	Predicted RBP	18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	INPP4A	Q96PE3	977 aa	Predicted RBP	18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	RIC8A	Q9NPQ8	531 aa		18.84	■□□□□ 0.61
CIRBP-233	ENST00000591622	TLR3	O15455	904 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	SEC24B	O95487	1268 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	MMP3	P08254	477 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	SCG2	P13521	617 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	IFNAR1	P17181	557 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	CCT2	P78371	535 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	SP2	Q02086	613 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	BAD	Q92934	168 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	PHKB	Q93100	1093 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	LARP6	Q9BRS8	491 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	NCOA5	Q9HCD5	579 aa	Known RBP	18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	RTEL1	Q9NZ71	1219 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	TBX21	Q9UL17	535 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	PCDHA6	Q9UN73	950 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	PCDHA8	Q9Y5H6	950 aa		18.83	■□□□□ 0.6
CIRBP-233	ENST00000591622	SMCO2	A6NFE2	343 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	SPATA31C2	B4DYI2	1134 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	CD4	P01730	458 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	RAG1	P15918	1043 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	UBA1	P22314	1058 aa	Known RBP	18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	ITGB8	P26012	769 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	ICAM3	P32942	547 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	ADCY7	P51828	1080 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	PKN1	Q16512	942 aa		18.82	■□□□□ 0.6
CIRBP-233	ENST00000591622	CELF3	Q5SZQ8	465 aa	Known RBP	18.82	■□□□□ 0.6

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