RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 FBXO40Q9UH90 709 aa26.79■■□□□ 1.88
LSM7-206ENST00000591515 MAD2L2Q9UI95 211 aa26.79■■□□□ 1.88
LSM7-206ENST00000591515 NAP1L2Q9ULW6 460 aaPredicted RBP26.79■■□□□ 1.88
LSM7-206ENST00000591515 SLC4A7Q9Y6M7 1214 aa26.79■■□□□ 1.88
LSM7-206ENST00000591515 KLF18A0A0U1RQI7 1052 aa26.78■■□□□ 1.88
LSM7-206ENST00000591515 ITGA7Q13683 1181 aa26.78■■□□□ 1.88
LSM7-206ENST00000591515 ANKRD1Q15327 319 aa26.78■■□□□ 1.88
LSM7-206ENST00000591515 APOA5Q6Q788 366 aa26.78■■□□□ 1.88
LSM7-206ENST00000591515 UPF3BQ9BZI7 483 aaKnown RBP26.78■■□□□ 1.88
LSM7-206ENST00000591515 TRPV6Q9H1D0 765 aa26.78■■□□□ 1.88
LSM7-206ENST00000591515 CCDC196A0A1B0GTZ2 297 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 PTGS1P23219 599 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 SMARCA1P28370 1054 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 CNTN2Q02246 1040 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 TNFAIP2Q03169 654 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 SKIV2LQ15477 1246 aaKnown RBP26.77■■□□□ 1.88
LSM7-206ENST00000591515 MICU3Q86XE3 530 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 CHST13Q8NET6 341 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 AGXT2Q9BYV1 514 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 UBA5Q9GZZ9 404 aa26.77■■□□□ 1.88
LSM7-206ENST00000591515 GNEQ9Y223 722 aaKnown RBP26.77■■□□□ 1.88
LSM7-206ENST00000591515 RFXAPO00287 272 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 B4GALT4O60513 344 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 CABYRO75952 493 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 ICAM1P05362 532 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 COL9A3Q14050 684 aaPredicted RBP26.76■■□□□ 1.87
LSM7-206ENST00000591515 TLK2Q86UE8 772 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 FANCBQ8NB91 859 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 SCLYQ96I15 445 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 MYL10Q9BUA6 226 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 CCPG1Q9ULG6 757 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 ARIH1Q9Y4X5 557 aaPredicted RBP26.76■■□□□ 1.87
LSM7-206ENST00000591515 MTCH2Q9Y6C9 303 aa26.76■■□□□ 1.87
LSM7-206ENST00000591515 COL4A4P53420 1690 aaPredicted RBP26.76■■□□□ 1.87
LSM7-206ENST00000591515 TANC1Q9C0D5 1861 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 ZBBXA8MT70 800 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 RBM25P49756 843 aaKnown RBP26.75■■□□□ 1.87
LSM7-206ENST00000591515 FSCN1Q16658 493 aaKnown RBP26.75■■□□□ 1.87
LSM7-206ENST00000591515 NOL8Q76FK4 1167 aaKnown RBP26.75■■□□□ 1.87
LSM7-206ENST00000591515 ADGRF4Q8IZF3 695 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 STAG2Q8N3U4 1231 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 FAM133AQ8N9E0 248 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 HCN4Q9Y3Q4 1203 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 MUC6Q6W4X9 2439 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 PTPRSQ13332 1948 aa26.75■■□□□ 1.87
LSM7-206ENST00000591515 GOLGA8AA7E2F4 631 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 GOLGA8BA8MQT2 603 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 ATP2A2P16615 1042 aaKnown RBP26.74■■□□□ 1.87
LSM7-206ENST00000591515 POU3F3P20264 500 aaPredicted RBP26.74■■□□□ 1.87
LSM7-206ENST00000591515 CDC37Q16543 378 aaPredicted RBP26.74■■□□□ 1.87
LSM7-206ENST00000591515 RTN1Q16799 776 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 RPUSD2Q8IZ73 545 aaKnown RBP26.74■■□□□ 1.87
LSM7-206ENST00000591515 AGBL1Q96MI9 1066 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 BACH2Q9BYV9 841 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 ALDH8A1Q9H2A2 487 aaPredicted RBP26.74■■□□□ 1.87
LSM7-206ENST00000591515 PIEZO1Q92508 2521 aa26.74■■□□□ 1.87
LSM7-206ENST00000591515 METAP2P50579 478 aaKnown RBP eCLIP26.73■■□□□ 1.873e-6■■□□□ 14.5
LSM7-206ENST00000591515 PSMC6P62333 389 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 APOBRQ0VD83 1088 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 TET1Q8NFU7 2136 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 SPZ1Q9BXG8 430 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 VAT1LQ9HCJ6 419 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 HOMER2Q9NSB8 354 aa26.73■■□□□ 1.87
LSM7-206ENST00000591515 EPOPA6NHQ4 379 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 CA3P07451 260 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 ALAS1P13196 640 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 TTLL4Q14679 1199 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 KRT40Q6A162 431 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 RIOX1Q9H6W3 641 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 ACAD9Q9H845 621 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 JMJD4Q9H9V9 463 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 CERS4Q9HA82 394 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 SEC63Q9UGP8 760 aaKnown RBP26.72■■□□□ 1.87
LSM7-206ENST00000591515 BRPF3Q9ULD4 1205 aa26.72■■□□□ 1.87
LSM7-206ENST00000591515 DDX49Q9Y6V7 483 aaKnown RBP26.72■■□□□ 1.87
LSM7-206ENST00000591515 ZNF536O15090 1300 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 SOWAHBA6NEL2 793 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 SMPD1P17405 629 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 NEK4P51957 841 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 EVCP57679 992 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 RRP36Q96EU6 259 aaKnown RBP26.71■■□□□ 1.87
LSM7-206ENST00000591515 SEZ6LQ9BYH1 1024 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 AP5M1Q9H0R1 490 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 RNF146Q9NTX7 359 aa26.71■■□□□ 1.87
LSM7-206ENST00000591515 ZBTB5O15062 677 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 DYNC1LI2O43237 492 aaPredicted RBP26.7■■□□□ 1.86
LSM7-206ENST00000591515 GTPBP6O43824 516 aaPredicted RBP26.7■■□□□ 1.86
LSM7-206ENST00000591515 RXRAP19793 462 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 SNAP25P60880 206 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 FBXO11Q86XK2 927 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 ZNF274Q96GC6 653 aaPredicted RBP26.7■■□□□ 1.86
LSM7-206ENST00000591515 TRERF1Q96PN7 1200 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 AMNQ9BXJ7 453 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 CPVLQ9H3G5 476 aa26.7■■□□□ 1.86
LSM7-206ENST00000591515 A1CFQ9NQ94 594 aaKnown RBP26.7■■□□□ 1.86
LSM7-206ENST00000591515 ABCB11O95342 1321 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 TLL1O43897 1013 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 TOB2Q14106 344 aaPredicted RBP26.69■■□□□ 1.86
LSM7-206ENST00000591515 QRICH1Q2TAL8 776 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 TMEM31Q5JXX7 168 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms