RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 HSD17B4P51659 736 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 TRDNQ13061 729 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 PTGISQ16647 500 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 PPP2R2DQ66LE6 453 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 KAT2BQ92831 832 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 MTMR8Q96EF0 704 aa25.32■■□□□ 1.64
DDX39A-215ENST00000590696 SUPT16HQ9Y5B9 1047 aaKnown RBP25.32■■□□□ 1.64
DDX39A-215ENST00000590696 PALM3A6NDB9 673 aaPredicted RBP25.31■■□□□ 1.64
DDX39A-215ENST00000590696 ZBTB5O15062 677 aa25.31■■□□□ 1.64
DDX39A-215ENST00000590696 PPP1R11O60927 126 aaPredicted RBP25.31■■□□□ 1.64
DDX39A-215ENST00000590696 CCDC85BQ15834 202 aaPredicted RBP25.31■■□□□ 1.64
DDX39A-215ENST00000590696 FTOQ9C0B1 505 aaKnown RBP eCLIP25.31■■□□□ 1.64
DDX39A-215ENST00000590696 PCDHA1Q9Y5I3 950 aa25.31■■□□□ 1.64
DDX39A-215ENST00000590696 MRVI1Q9Y6F6 885 aa25.31■■□□□ 1.64
DDX39A-215ENST00000590696 SPTBN5Q9NRC6 3674 aaKnown RBP25.31■■□□□ 1.64
DDX39A-215ENST00000590696 CYP21A2P08686 494 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 GHRHRQ02643 423 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 PTH1RQ03431 593 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 DGKDQ16760 1214 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 TJAP1Q5JTD0 557 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 GDF6Q6KF10 455 aaPredicted RBP25.3■■□□□ 1.64
DDX39A-215ENST00000590696 SESTD1Q86VW0 696 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 RUFY2Q8WXA3 655 aa25.3■■□□□ 1.64
DDX39A-215ENST00000590696 MAP3K20Q9NYL2 800 aaKnown RBP25.3■■□□□ 1.64
DDX39A-215ENST00000590696 MYCLP12524 364 aaPredicted RBP25.29■■□□□ 1.64
DDX39A-215ENST00000590696 CHMLP26374 656 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 TMEM67Q5HYA8 995 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 CCDC155Q8N6L0 562 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 EMID1Q96A84 441 aaPredicted RBP25.29■■□□□ 1.64
DDX39A-215ENST00000590696 CTAGE1Q96RT6 745 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 PDCD2LQ9BRP1 358 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 U3KPZ7 1027 aaPredicted RBP25.29■■□□□ 1.64
DDX39A-215ENST00000590696 TANC1Q9C0D5 1861 aa25.29■■□□□ 1.64
DDX39A-215ENST00000590696 MYO9BQ13459 2157 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 IFIT3O14879 490 aaKnown RBP25.28■■□□□ 1.64
DDX39A-215ENST00000590696 LAMC2Q13753 1193 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 STOX1Q6ZVD7 989 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 HOMER1Q86YM7 354 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 DHX37Q8IY37 1157 aaKnown RBP25.28■■□□□ 1.64
DDX39A-215ENST00000590696 CAGE1Q8TC20 777 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 SLC9A7Q96T83 725 aa25.28■■□□□ 1.64
DDX39A-215ENST00000590696 ERICH2A1L162 156 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 HOXA13P31271 388 aaPredicted RBP25.27■■□□□ 1.64
DDX39A-215ENST00000590696 GRM4Q14833 912 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 SLC35G1Q2M3R5 365 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 SAMD3Q8N6K7 520 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 PHOSPHO2Q8TCD6 241 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 AFAP1L1Q8TED9 768 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 PIGSQ96S52 555 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 ALG1Q9BT22 464 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 RIOX1Q9H6W3 641 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 SENP2Q9HC62 589 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 CHD7Q9P2D1 2997 aa25.27■■□□□ 1.64
DDX39A-215ENST00000590696 RGS20O76081 388 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 CA3P07451 260 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 PSEN2P49810 448 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 RALYLQ86SE5 291 aaKnown RBP25.26■■□□□ 1.63
DDX39A-215ENST00000590696 C7orf31Q8N865 590 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 PPTC7Q8NI37 304 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 ATXN2LQ8WWM7 1075 aaKnown RBP25.26■■□□□ 1.63
DDX39A-215ENST00000590696 THEGQ9P2T0 379 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 HDAC6Q9UBN7 1215 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 GTF2IRD1Q9UHL9 959 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 TAF6LQ9Y6J9 622 aa25.26■■□□□ 1.63
DDX39A-215ENST00000590696 E7EWF7 191 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 WTAPQ15007 396 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 PGM5Q15124 567 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 VSIG10LQ86VR7 867 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 NCOA7Q8NI08 942 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 DHX38Q92620 1227 aaKnown RBP25.25■■□□□ 1.63
DDX39A-215ENST00000590696 KATNAL1Q9BW62 490 aa25.25■■□□□ 1.63
DDX39A-215ENST00000590696 TRIP12Q14669 1992 aaPredicted RBP25.25■■□□□ 1.63
DDX39A-215ENST00000590696 MYH7BA7E2Y1 1941 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 GCOM1H8Y6P7 765 aaPredicted RBP25.24■■□□□ 1.63
DDX39A-215ENST00000590696 SORBS3O60504 671 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 POLR2MP0CAP2 368 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 ZNF286BP0CG31 522 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 SELPP16109 830 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 TRAF1Q13077 416 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 MFSD10Q14728 455 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 KIAA0753Q2KHM9 967 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 KCNV1Q6PIU1 500 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 LRRC8DQ7L1W4 858 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 IL31RAQ8NI17 732 aa25.24■■□□□ 1.63
DDX39A-215ENST00000590696 HAS3O00219 553 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 CYTH3O43739 400 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 BAIAP3O94812 1187 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 F2P00734 622 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 TROAPQ12815 778 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 GPNMBQ14956 572 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 SART3Q15020 963 aaKnown RBP25.23■■□□□ 1.63
DDX39A-215ENST00000590696 MYSM1Q5VVJ2 828 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 HERC6Q8IVU3 1022 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 MICALL1Q8N3F8 863 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 ZFP91Q96JP5 570 aaPredicted RBP25.23■■□□□ 1.63
DDX39A-215ENST00000590696 CERS4Q9HA82 394 aa25.23■■□□□ 1.63
DDX39A-215ENST00000590696 TET1Q8NFU7 2136 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 PNMA6FA0A0J9YX94 578 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 KIF28PB7ZC32 967 aa25.22■■□□□ 1.63
DDX39A-215ENST00000590696 RFXAPO00287 272 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms