RNA–Protein interactions for RNA: ENST00000590445.5

GCDH-210, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 4

Gene GCDH, Length 496 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-210ENST00000590445 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
GCDH-210ENST00000590445 CLTBP09497 229 aa18.5■□□□□ 0.55
GCDH-210ENST00000590445 EIF2AK2P19525 551 aaKnown RBP18.5■□□□□ 0.55
GCDH-210ENST00000590445 BRDTQ58F21 947 aaPredicted RBP18.5■□□□□ 0.55
GCDH-210ENST00000590445 TMEM63BQ5T3F8 832 aa18.5■□□□□ 0.55
GCDH-210ENST00000590445 ZNF713Q8N859 430 aaPredicted RBP18.5■□□□□ 0.55
GCDH-210ENST00000590445 UBE2OQ9C0C9 1292 aaKnown RBP18.5■□□□□ 0.55
GCDH-210ENST00000590445 ARVCFO00192 962 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 CPLX1O14810 134 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 EIF3JO75822 258 aaKnown RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 SLC34A2O95436 690 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 NR3C2P08235 984 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 TXNP10599 105 aaKnown RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 IFNAR1P17181 557 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 PTGS1P23219 599 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 HOXA13P31271 388 aaPredicted RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 CPT1AP50416 773 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 FXR1P51114 621 aaKnown RBP eCLIP18.49■□□□□ 0.55
GCDH-210ENST00000590445 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 MDM2Q00987 491 aaPredicted RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 OR6J1Q8NGC5 347 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 SEZ6LQ9BYH1 1024 aa18.49■□□□□ 0.55
GCDH-210ENST00000590445 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
GCDH-210ENST00000590445 PFKFB2O60825 505 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 CDK7P50613 346 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 NTRK3Q16288 839 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 SEPT14Q6ZU15 432 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 TEX2Q8IWB9 1127 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 PDCD2LQ9BRP1 358 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
GCDH-210ENST00000590445 RNF26Q9BY78 433 aaPredicted RBP18.48■□□□□ 0.55
GCDH-210ENST00000590445 POLR3EQ9NVU0 708 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 TPCN1Q9ULQ1 816 aa18.48■□□□□ 0.55
GCDH-210ENST00000590445 V9GY48 417 aaPredicted RBP18.48■□□□□ 0.55
GCDH-210ENST00000590445 RANBP2P49792 3224 aaKnown RBP18.47■□□□□ 0.55
GCDH-210ENST00000590445 TRIM43BA6NCK2 446 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 KIAA0355O15063 1070 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 PRPF3O43395 683 aaKnown RBP18.47■□□□□ 0.55
GCDH-210ENST00000590445 ST18O60284 1047 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 CDKL5O76039 1030 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 STK3Q13188 491 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 PPP1R18Q6NYC8 613 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 CCDC62Q6P9F0 684 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 SH3RF1Q7Z6J0 888 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 FCHSD1Q86WN1 690 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 TRIM22Q8IYM9 498 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 TDHQ8IZJ6 230 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 CUL5Q93034 780 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 TRIM43Q96BQ3 446 aaPredicted RBP18.47■□□□□ 0.55
GCDH-210ENST00000590445 NCOA5Q9HCD5 579 aaKnown RBP18.47■□□□□ 0.55
GCDH-210ENST00000590445 TMEM39AQ9NV64 488 aa18.47■□□□□ 0.55
GCDH-210ENST00000590445 hCG_1642624A0A1W2PR95 340 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
GCDH-210ENST00000590445 KPNA6O60684 536 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 ARIH2O95376 493 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 ITGA7Q13683 1181 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 HEATR3Q7Z4Q2 680 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 VSIG10LQ86VR7 867 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 LIMCH1Q9UPQ0 1083 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
GCDH-210ENST00000590445 KIAA1217Q5T5P2 1943 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 A6NJR5 290 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 GH1P01241 217 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 MYCLP12524 364 aaPredicted RBP18.45■□□□□ 0.54
GCDH-210ENST00000590445 RAG1P15918 1043 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 CCND2P30279 289 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 SCRN1Q12765 414 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 PGM5Q15124 567 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 PFKFB3Q16875 520 aaPredicted RBP18.45■□□□□ 0.54
GCDH-210ENST00000590445 KCNV1Q6PIU1 500 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 SLC43A3Q8NBI5 491 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 COPS5Q92905 334 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 BADQ92934 168 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 SLC26A6Q9BXS9 759 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 GLT8D2Q9H1C3 349 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 BARHL2Q9NY43 387 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
GCDH-210ENST00000590445 PIK3CDO00329 1044 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 MYL3P08590 195 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 SCG2P13521 617 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 NAPAP54920 295 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 SSRP1Q08945 709 aaKnown RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 ME3Q16798 604 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 LY6KQ17RY6 165 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 WWC2Q6AWC2 1192 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 FAM126BQ8IXS8 530 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 CCDC12Q8WUD4 166 aaPredicted RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 PHKBQ93100 1093 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 MTG1Q9BT17 334 aaPredicted RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 PCDH10Q9P2E7 1040 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
GCDH-210ENST00000590445 FRMPD4Q14CM0 1322 aa18.44■□□□□ 0.54
GCDH-210ENST00000590445 DEXIO95424 95 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms