RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 MRVI1Q9Y6F6 885 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
TPM4-212ENST00000590180 LCTP09848 1927 aa13.93□□□□□ -0.18
TPM4-212ENST00000590180 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
TPM4-212ENST00000590180 A0A1W2PPC1 479 aa13.92□□□□□ -0.18
TPM4-212ENST00000590180 EPB41L2O43491 1005 aaKnown RBP13.92□□□□□ -0.18
TPM4-212ENST00000590180 RPS6KB1P23443 525 aa13.92□□□□□ -0.18
TPM4-212ENST00000590180 CCND2P30279 289 aa13.92□□□□□ -0.18
TPM4-212ENST00000590180 FXR1P51114 621 aaKnown RBP eCLIP13.92□□□□□ -0.18
TPM4-212ENST00000590180 HEATR3Q7Z4Q2 680 aa13.92□□□□□ -0.18
TPM4-212ENST00000590180 MTG1Q9BT17 334 aaPredicted RBP13.92□□□□□ -0.18
TPM4-212ENST00000590180 DDX41Q9UJV9 622 aaKnown RBP13.92□□□□□ -0.18
TPM4-212ENST00000590180 A6NJR5 290 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 KIAA0355O15063 1070 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 KPNA6O60684 536 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 CDC27P30260 824 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 ADD1P35611 737 aaKnown RBP13.91□□□□□ -0.18
TPM4-212ENST00000590180 METAP2P50579 478 aaKnown RBP eCLIP13.91□□□□□ -0.18
TPM4-212ENST00000590180 KCNV1Q6PIU1 500 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 DHX37Q8IY37 1157 aaKnown RBP13.91□□□□□ -0.18
TPM4-212ENST00000590180 TDHQ8IZJ6 230 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 IL31RAQ8NI17 732 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 AFG1LQ8WV93 481 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
TPM4-212ENST00000590180 RTEL1Q9NZ71 1219 aa13.91□□□□□ -0.18
TPM4-212ENST00000590180 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 MEIS2O14770 477 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 SORBS3O60504 671 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 ITGB8P26012 769 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 PURAQ00577 322 aaKnown RBP13.9□□□□□ -0.18
TPM4-212ENST00000590180 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 RUFY3Q7L099 469 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 FAM126BQ8IXS8 530 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 SEZ6LQ9BYH1 1024 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 FAM217BQ9NTX9 383 aaPredicted RBP13.9□□□□□ -0.18
TPM4-212ENST00000590180 CYP46A1Q9Y6A2 500 aa13.9□□□□□ -0.18
TPM4-212ENST00000590180 GRIN2DO15399 1336 aa13.9□□□□□ -0.19
TPM4-212ENST00000590180 PIK3CDO00329 1044 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 RGS20O76081 388 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 TIMP1P01033 207 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 RCAN1P53805 252 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 NAPAP54920 295 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 ARHGAP1Q07960 439 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 NBPF20Q3BBV1 942 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 GNPTABQ3T906 1256 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 SLC43A3Q8NBI5 491 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 ZSWIM6Q9HCJ5 1215 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
TPM4-212ENST00000590180 SPDYE3A6NKU9 549 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 GGPS1O95749 300 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 CD4P01730 458 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 MMP3P08254 477 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 TGFB3P10600 412 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 CCT2P78371 535 aaKnown RBP13.88□□□□□ -0.19
TPM4-212ENST00000590180 MRPS9P82933 396 aaKnown RBP13.88□□□□□ -0.19
TPM4-212ENST00000590180 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
TPM4-212ENST00000590180 FUT2Q10981 343 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 UBE2SQ16763 222 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 TBX21Q9UL17 535 aa13.88□□□□□ -0.19
TPM4-212ENST00000590180 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 STAM2O75886 525 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SLC34A2O95436 690 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SUPT20HL2P0C7V6 817 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 CYP2C18P33260 490 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SP2Q02086 613 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 FPGSQ05932 587 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SHHQ15465 462 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 DGKDQ16760 1214 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 CELF3Q5SZQ8 465 aaKnown RBP13.87□□□□□ -0.19
TPM4-212ENST00000590180 MYSM1Q5VVJ2 828 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 NLRX1Q86UT6 975 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 FBXL16Q8N461 479 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SPATA33Q96N06 139 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
TPM4-212ENST00000590180 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
TPM4-212ENST00000590180 TM6SF1Q9BZW5 370 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 ALDH8A1Q9H2A2 487 aaPredicted RBP13.87□□□□□ -0.19
TPM4-212ENST00000590180 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 PCDHA6Q9UN73 950 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 PCDHA8Q9Y5H6 950 aa13.87□□□□□ -0.19
TPM4-212ENST00000590180 SPATA31C2B4DYI2 1134 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 SOX1O00570 391 aaPredicted RBP13.86□□□□□ -0.19
TPM4-212ENST00000590180 B4GALT4O60513 344 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 PPFIA4O75335 1185 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 PDIA3P30101 505 aaKnown RBP13.86□□□□□ -0.19
TPM4-212ENST00000590180 ADCY7P51828 1080 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 LRIT3Q3SXY7 679 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 C9orf50Q5SZB4 431 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 PCNX4Q63HM2 1172 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 MFSD5Q6N075 450 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
TPM4-212ENST00000590180 PPTC7Q8NI37 304 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms