RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 SATB1Q01826 763 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 FAM167BQ9BTA0 163 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 IFT122Q9HBG6 1241 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 PDHA1P08559 390 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 MX2P20592 715 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 MESDQ14696 234 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 SGO2Q562F6 1265 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 OSBPL1AQ9BXW6 950 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 MIS12Q9H081 205 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 AATFQ9NY61 560 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 TFAP4Q01664 338 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 TEX9Q8N6V9 391 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 PI4K2BQ8TCG2 481 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 WDR24Q96S15 920 aa15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 BIN2Q9UBW5 565 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
SMARCA4-214ENST00000589677 TTC4O95801 387 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 AFPP02771 609 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 TTC16Q8NEE8 873 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 STXBP3O00186 592 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 SYT2Q8N9I0 419 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 ECT2Q9H8V3 914 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 COL4A3BPQ9Y5P4 624 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 PDE6AP16499 860 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 SLC12A2P55011 1212 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 ASPHQ12797 758 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 PDCD2Q16342 344 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.86■□□□□ 0.134e-6■■■■■ 29.8
SMARCA4-214ENST00000589677 SDCCAG3Q96C92 435 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 KCNG1Q9UIX4 513 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 PRDM4Q9UKN5 801 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 PCDHA12Q9UN75 941 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 CYP2J2P51589 502 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 SPARCL1Q14515 664 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 RPS6KA2Q15349 733 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 KRT80Q6KB66 452 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 GSPT2Q8IYD1 628 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 TRIML2Q8N7C3 387 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 HNRNPLLQ8WVV9 542 aaKnown RBP15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 STAMBPL1Q96FJ0 436 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 NDST4Q9H3R1 872 aa15.86■□□□□ 0.13
SMARCA4-214ENST00000589677 GYG2O15488 501 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 TRPA1O75762 1119 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 IFNAR1P17181 557 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 ATF7P17544 494 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 GARSP41250 739 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 NR1H3Q13133 447 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 CCDC92Q53HC0 331 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 SLFN12Q8IYM2 578 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 PDZD8Q8NEN9 1154 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 ZNF473Q8WTR7 871 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 GFM2Q969S9 779 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 TRIM11Q96F44 468 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 AP1M1Q9BXS5 423 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 LGALS16A8MUM7 142 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 KRT3P12035 628 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 HIBADHP31937 336 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 MDH1P40925 334 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 TMCO4Q5TGY1 634 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 LARP4BQ92615 738 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 SERPINI1Q99574 410 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 CLASP1Q7Z460 1538 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 HNRNPH1P31943 449 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 YWHAEP62258 255 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 CEP70Q8NHQ1 597 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 CDKL2Q92772 493 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 STK17AQ9UEE5 414 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 NCKAP5LQ9HCH0 1330 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 H0Y3Z8 333 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 DAPK3O43293 454 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 APOEP02649 317 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 ADCY1Q08828 1119 aa15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 ALDH8A1Q9H2A2 487 aaPredicted RBP15.85■□□□□ 0.13
SMARCA4-214ENST00000589677 EXOC1LA0A1B0GW35 172 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 MT-ND3P03897 115 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 SLC8A3P57103 927 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 YWHAGP61981 247 aaKnown RBP eCLIP15.84■□□□□ 0.134e-6■■□□□ 13.3
SMARCA4-214ENST00000589677 TOB2Q14106 344 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 NYAP1Q6ZVC0 841 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 FAM133AQ8N9E0 248 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 THOC1Q96FV9 657 aaKnown RBP15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 MYO1FO00160 1098 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 BACH1O14867 736 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 PSMD2Q13200 908 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 PLCB4Q15147 1175 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 MMEL1Q495T6 779 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 SLC52A2Q9HAB3 445 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 RAD23BP54727 409 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 IQCB1Q15051 598 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 CYP4F22Q6NT55 531 aa15.84■□□□□ 0.13
SMARCA4-214ENST00000589677 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms