RNA–Protein interactions for RNA: ENST00000589367.5

NLE1-206, Transcript of notchless homolog 1, humanhuman

TSL 5

Gene NLE1, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-206ENST00000589367 CCND2P30279 289 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 PPIGQ13427 754 aaKnown RBP eCLIP23.15■■□□□ 1.38e-7■■■□□ 14.9
NLE1-206ENST00000589367 KCNV1Q6PIU1 500 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 TMTC3Q6ZXV5 915 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 MICU3Q86XE3 530 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 RAB11FIP4Q86YS3 637 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 CMTR1Q8N1G2 835 aaKnown RBP23.15■■□□□ 1.3
NLE1-206ENST00000589367 AFG1LQ8WV93 481 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
NLE1-206ENST00000589367 MYH6P13533 1939 aa23.14■■□□□ 1.3
NLE1-206ENST00000589367 RGS20O76081 388 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 MMP3P08254 477 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 SUPT20HL2P0C7V6 817 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 APOA5Q6Q788 366 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 IL31RAQ8NI17 732 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 KCNB2Q92953 911 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 CUL5Q93034 780 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.29
NLE1-206ENST00000589367 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.29
NLE1-206ENST00000589367 TCEANC2Q96MN5 208 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 SZT2Q5T011 3432 aa23.14■■□□□ 1.29
NLE1-206ENST00000589367 LAMC2Q13753 1193 aa23.13■■□□□ 1.29
NLE1-206ENST00000589367 NBPF20Q3BBV1 942 aa23.13■■□□□ 1.29
NLE1-206ENST00000589367 NFRKBQ6P4R8 1299 aa23.13■■□□□ 1.29
NLE1-206ENST00000589367 DEFB123Q8N688 67 aa23.13■■□□□ 1.29
NLE1-206ENST00000589367 SMARCC2Q8TAQ2 1214 aa23.13■■□□□ 1.29
NLE1-206ENST00000589367 RBM28Q9NW13 759 aaKnown RBP23.13■■□□□ 1.29
NLE1-206ENST00000589367 FRMPD4Q14CM0 1322 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 REC8O95072 547 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 CSF2RAP15509 400 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 CYP2C18P33260 490 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 HSPA4P34932 840 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 PTPN11Q06124 597 aaPredicted RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 DHX37Q8IY37 1157 aaKnown RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 NOC4LQ9BVI4 516 aaKnown RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 TRMT13Q9NUP7 481 aaKnown RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 BAZ2BQ9UIF8 2168 aaKnown RBP23.12■■□□□ 1.29
NLE1-206ENST00000589367 BRPF3Q9ULD4 1205 aa23.12■■□□□ 1.29
NLE1-206ENST00000589367 ZBTB43O43298 467 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 STAM2O75886 525 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 TGFB3P10600 412 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 DGKDQ16760 1214 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 FAM47CQ5HY64 1035 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 FAM109BQ6ICB4 259 aaPredicted RBP23.11■■□□□ 1.29
NLE1-206ENST00000589367 USP17L6PQ6QN14 398 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 Q7L0L9 218 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 CCDC82Q8N4S0 544 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 PPTC7Q8NI37 304 aa23.11■■□□□ 1.29
NLE1-206ENST00000589367 MEIS2O14770 477 aa23.1■■□□□ 1.29
NLE1-206ENST00000589367 SMAD3P84022 425 aaKnown RBP23.1■■□□□ 1.29
NLE1-206ENST00000589367 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.1■■□□□ 1.291e-6■■□□□ 12.3
NLE1-206ENST00000589367 UMODL1Q5DID0 1318 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 hCG_1642624A0A1W2PR95 340 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 RCAN1P53805 252 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 RTN1Q16799 776 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 GNPTABQ3T906 1256 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 TMEM240Q5SV17 173 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 CELF3Q5SZQ8 465 aaKnown RBP23.09■■□□□ 1.29
NLE1-206ENST00000589367 ERICH6BQ5W0A0 696 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 PSRC1Q6PGN9 363 aaPredicted RBP23.09■■□□□ 1.29
NLE1-206ENST00000589367 C16orf59Q7L2K0 433 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 ZFP91Q96JP5 570 aaPredicted RBP23.09■■□□□ 1.29
NLE1-206ENST00000589367 JAKMIP1Q96N16 626 aaKnown RBP23.09■■□□□ 1.29
NLE1-206ENST00000589367 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 SNX14Q9Y5W7 946 aa23.09■■□□□ 1.29
NLE1-206ENST00000589367 KLF18A0A0U1RQI7 1052 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 GGPS1O95749 300 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 CYP2C9P11712 490 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 UBA1P22314 1058 aaKnown RBP23.08■■□□□ 1.29
NLE1-206ENST00000589367 MRPS9P82933 396 aaKnown RBP23.08■■□□□ 1.29
NLE1-206ENST00000589367 FGD1P98174 961 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 MYSM1Q5VVJ2 828 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 XRRA1Q6P2D8 792 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 KAT2BQ92831 832 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 INPP4AQ96PE3 977 aaPredicted RBP23.08■■□□□ 1.29
NLE1-206ENST00000589367 IL23AQ9NPF7 189 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 MTMR10Q9NXD2 777 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 PPP4R2Q9NY27 417 aa23.08■■□□□ 1.29
NLE1-206ENST00000589367 GOLGA8AA7E2F4 631 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 GOLGA8BA8MQT2 603 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 EPB41L2O43491 1005 aaKnown RBP23.07■■□□□ 1.28
NLE1-206ENST00000589367 ACRP10323 421 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 HOXD8P13378 290 aaPredicted RBP23.07■■□□□ 1.28
NLE1-206ENST00000589367 ICAM3P32942 547 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 CCL23P55773 120 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 CHMP4BP1P59074 171 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 SP2Q02086 613 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 PCNX4Q63HM2 1172 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 BLOC1S2Q6QNY1 142 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 HEATR3Q7Z4Q2 680 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 SESTD1Q86VW0 696 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 SPATA33Q96N06 139 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 KATNAL1Q9BW62 490 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 WNT8AQ9H1J5 351 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 SCN10AQ9Y5Y9 1956 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 CNTNAP5Q8WYK1 1306 aa23.07■■□□□ 1.28
NLE1-206ENST00000589367 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
NLE1-206ENST00000589367 FUT2Q10981 343 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms