RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 IPO7O95373 1038 aaKnown RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 VEGFAP15692 232 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 DNM2P50570 870 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CLDN10P78369 228 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GABPB1Q06547 395 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 UTP14CQ5TAP6 766 aaKnown RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CNNM4Q6P4Q7 775 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 FBXO38Q6PIJ6 1188 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CEP112Q8N8E3 955 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GIMAP8Q8ND71 665 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 RASGRP4Q8TDF6 673 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CDK5RAP3Q96JB5 506 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 TRIM47Q96LD4 638 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 ZC3H12CQ9C0D7 883 aaKnown RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 COA1Q9GZY4 146 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 SWAP70Q9UH65 585 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 LUC7L2Q9Y383 392 aaKnown RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 TUBBP07437 444 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GOLGA8HP0CJ92 632 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 H2AFXP16104 143 aaPredicted RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CDC25AP30304 524 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 KRT9P35527 623 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 FAM193AP78312 1265 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 PTPN21Q16825 1174 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 DMRTA1Q5VZB9 504 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 SP8Q8IXZ3 490 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 SLC44A5Q8NCS7 719 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 OR8K1Q8NGG5 319 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GOLGA1Q92805 767 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CEP95Q96GE4 821 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 MTRQ99707 1265 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 NAP1L4Q99733 375 aaKnown RBP8.28□□□□□ -1.08
ZNF540-206ENST00000589117 CARD6Q9BX69 1037 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GLT8D2Q9H1C3 349 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 LZTFL1Q9NQ48 299 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 ABHD10Q9NUJ1 306 aa8.28□□□□□ -1.08
ZNF540-206ENST00000589117 GAKO14976 1311 aa8.27□□□□□ -1.08
ZNF540-206ENST00000589117 FAM205AQ6ZU69 1335 aa8.27□□□□□ -1.08
ZNF540-206ENST00000589117 GYPCP04921 128 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 GYS1P13807 737 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 KRT83P78385 493 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 FAM182BQ5T319 152 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 SV2BQ7L1I2 683 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 RABGGTAQ92696 567 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 C7orf25Q9BPX7 421 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 RIOX1Q9H6W3 641 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 VAT1LQ9HCJ6 419 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 TAB2Q9NYJ8 693 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 KIAA1024Q9UPX6 916 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 MRFAP1Q9Y605 127 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 CASZ1Q86V15 1759 aa8.27□□□□□ -1.09
ZNF540-206ENST00000589117 LGALS16A8MUM7 142 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TADA3O75528 432 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TTLL1O95922 423 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 HLA-DOAP06340 250 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 NOVP48745 357 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 ADCY7P51828 1080 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MRPL12P52815 198 aaKnown RBP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 RHBDL3P58872 404 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 PDIA5Q14554 519 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 CALCRLQ16602 461 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 KIF4BQ2VIQ3 1234 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 GPATCH4Q5T3I0 446 aaKnown RBP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 CSGALNACT2Q8N6G5 542 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 EHBP1Q8NDI1 1231 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TBCKQ8TEA7 893 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 WDR24Q96S15 920 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 DESI2Q9BSY9 194 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TMEM60Q9H2L4 133 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MTMR4Q9NYA4 1195 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 STK17AQ9UEE5 414 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TRPC5Q9UL62 973 aaPredicted RBP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MAPK8IP1Q9UQF2 711 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 GDAQ9Y2T3 454 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MARCH6O60337 910 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 PLCG1P19174 1290 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 CCNE1P24864 410 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 ALDH1B1P30837 517 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TECP42680 631 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 FXR1P51114 621 aaKnown RBP eCLIP8.26□□□□□ -1.09
ZNF540-206ENST00000589117 GTF2IP78347 998 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 ASIC1P78348 528 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 DMTNQ08495 405 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 GRIK5Q16478 980 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 COBLL1Q53SF7 1204 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 ZNF569Q5MCW4 686 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 FKBP15Q5T1M5 1219 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 AMIGO3Q86WK7 504 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 NPAS4Q8IUM7 802 aa8.26□□□□□ -1.09
ZNF540-206ENST00000589117 MB21D1Q8N884 522 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms