RNA–Protein interactions for RNA: ENST00000588901.5

ATP6V0A1-220, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2

Gene ATP6V0A1, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-220ENST00000588901 PSMC6P62333 389 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 ARHGAP1Q07960 439 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 FUT2Q10981 343 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 RTN1Q16799 776 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 LY6KQ17RY6 165 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 BRDTQ58F21 947 aaPredicted RBP20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 BLOC1S2Q6QNY1 142 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 FCHSD1Q86WN1 690 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 FBXL16Q8N461 479 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 CCDC82Q8N4S0 544 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 KIAA1217Q5T5P2 1943 aa20.72■□□□□ 0.91
ATP6V0A1-220ENST00000588901 hCG_1642624A0A1W2PR95 340 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 SOX1O00570 391 aaPredicted RBP20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 MEIS2O14770 477 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 GH1P01241 217 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 CD4P01730 458 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 RPS6KB1P23443 525 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 LRIT3Q3SXY7 679 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 DDX41Q9UJV9 622 aaKnown RBP20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 NID2Q14112 1375 aa20.71■□□□□ 0.91
ATP6V0A1-220ENST00000588901 GOLGA8AA7E2F4 631 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 GOLGA8BA8MQT2 603 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 KPNA6O60684 536 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MYL3P08590 195 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MYCLP12524 364 aaPredicted RBP20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 RAG1P15918 1043 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 CCND2P30279 289 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 Q6ZUG5 572 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 EMID1Q96A84 441 aaPredicted RBP20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MTG1Q9BT17 334 aaPredicted RBP20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 USP26Q9BXU7 913 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 AGXT2Q9BYV1 514 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 FAM217BQ9NTX9 383 aaPredicted RBP20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TLR3O15455 904 aaKnown RBP20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 CASTP20810 708 aaKnown RBP20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 PSMA5P28066 241 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 CDC27P30260 824 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 FGD1P98174 961 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 USP17L6PQ6QN14 398 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 AFG1LQ8WV93 481 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 BRF1Q92994 677 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 CUL5Q93034 780 aa20.69■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TIMP1P01033 207 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MMP3P08254 477 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MRPS9P82933 396 aaKnown RBP20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 APOBRQ0VD83 1088 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 KCNV1Q6PIU1 500 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 HEATR3Q7Z4Q2 680 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 SMARCC2Q8TAQ2 1214 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 GPKOWQ92917 476 aaPredicted RBP eCLIP20.68■□□□□ 0.97e-13■■■■□ 23.9
ATP6V0A1-220ENST00000588901 PSTPIP2Q9H939 334 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 SCN10AQ9Y5Y9 1956 aa20.68■□□□□ 0.9
ATP6V0A1-220ENST00000588901 B4GALT4O60513 344 aa20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 STAM2O75886 525 aa20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 WWC2Q6AWC2 1192 aa20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 LRCH3Q96II8 777 aa20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 INPP4AQ96PE3 977 aaPredicted RBP20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TGFB3P10600 412 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 METAP2P50579 478 aaKnown RBP eCLIP20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 FPGSQ05932 587 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 LAMC2Q13753 1193 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 C9orf50Q5SZB4 431 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 PPP1R18Q6NYC8 613 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 PPTC7Q8NI37 304 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TRPV6Q9H1D0 765 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
ATP6V0A1-220ENST00000588901 HOXD8P13378 290 aaPredicted RBP20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 ADD1P35611 737 aaKnown RBP20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 EPHB4P54760 987 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 EVCP57679 992 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 SP2Q02086 613 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 SHHQ15465 462 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 UBE2SQ16763 222 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 GNPTABQ3T906 1256 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 PCNX4Q63HM2 1172 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 MFSD5Q6N075 450 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TYW1BQ6NUM6 668 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 XRRA1Q6P2D8 792 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 NFRKBQ6P4R8 1299 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 RUFY3Q7L099 469 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 DHX37Q8IY37 1157 aaKnown RBP20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 ZFP91Q96JP5 570 aaPredicted RBP20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 TM6SF1Q9BZW5 370 aa20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 V9GY48 417 aaPredicted RBP20.65■□□□□ 0.9
ATP6V0A1-220ENST00000588901 CCDC196A0A1B0GTZ2 297 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 hCG_1984214I3L0E3 225 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 ICAM3P32942 547 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 SEMA3FQ13275 785 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 DGKDQ16760 1214 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 CELF3Q5SZQ8 465 aaKnown RBP20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 MYSM1Q5VVJ2 828 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 TEX2Q8IWB9 1127 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 ZNF713Q8N859 430 aaPredicted RBP20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 KAT2BQ92831 832 aa20.64■□□□□ 0.89
ATP6V0A1-220ENST00000588901 STXBP3O00186 592 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms