RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
RFX1-204ENST00000588885 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 MROH7Q68CQ1 1323 aa13.36□□□□□ -0.27
RFX1-204ENST00000588885 NKRFO15226 690 aaKnown RBP eCLIP13.35□□□□□ -0.27
RFX1-204ENST00000588885 TLR3O15455 904 aaKnown RBP13.35□□□□□ -0.27
RFX1-204ENST00000588885 EIF3JO75822 258 aaKnown RBP13.35□□□□□ -0.27
RFX1-204ENST00000588885 TIMP1P01033 207 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 CPA1P15085 419 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 CYP2C18P33260 490 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 LIFRP42702 1097 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 FPGSQ05932 587 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 BRDTQ58F21 947 aaPredicted RBP13.35□□□□□ -0.27
RFX1-204ENST00000588885 ZNF697Q5TEC3 545 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 CCDC62Q6P9F0 684 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 AFG1LQ8WV93 481 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 FAM161BQ96MY7 647 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 MAF1Q9H063 256 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
RFX1-204ENST00000588885 BAZ2BQ9UIF8 2168 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 REC8O95072 547 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 GNAQP50148 359 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 PURAQ00577 322 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 TRAF1Q13077 416 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 NBPF20Q3BBV1 942 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 SLC43A3Q8NBI5 491 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 MAP3K14Q99558 947 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 PDCD2LQ9BRP1 358 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 MTA3Q9BTC8 594 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 SPZ1Q9BXG8 430 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 TRMT13Q9NUP7 481 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 NAP1L2Q9ULW6 460 aaPredicted RBP13.34□□□□□ -0.27
RFX1-204ENST00000588885 MRVI1Q9Y6F6 885 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 MYO9BQ13459 2157 aa13.34□□□□□ -0.27
RFX1-204ENST00000588885 A6NJR5 290 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 B4GALT4O60513 344 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 GH1P01241 217 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 CD4P01730 458 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 CALM1P0DP23 149 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 CALM2P0DP24 149 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 CALM3P0DP25 149 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 ACRP10323 421 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 CCL23P55773 120 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 ARHGAP1Q07960 439 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 PGM5Q15124 567 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 GPKOWQ92917 476 aaPredicted RBP eCLIP13.33□□□□□ -0.28
RFX1-204ENST00000588885 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 ALDH8A1Q9H2A2 487 aaPredicted RBP13.33□□□□□ -0.28
RFX1-204ENST00000588885 UPF2Q9HAU5 1272 aaKnown RBP13.33□□□□□ -0.28
RFX1-204ENST00000588885 MAP3K20Q9NYL2 800 aaKnown RBP13.33□□□□□ -0.28
RFX1-204ENST00000588885 DDX41Q9UJV9 622 aaKnown RBP13.33□□□□□ -0.28
RFX1-204ENST00000588885 BRPF3Q9ULD4 1205 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 LCTP09848 1927 aa13.33□□□□□ -0.28
RFX1-204ENST00000588885 COL6A3P12111 3177 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 A0A0C4DFX4 3053 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 RGS20O76081 388 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 CYP2C9P11712 490 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 CSF2RAP15509 400 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 CCND2P30279 289 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 FGD1P98174 961 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 GHRHRQ02643 423 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 TMTC3Q6ZXV5 915 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 C16orf59Q7L2K0 433 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
RFX1-204ENST00000588885 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 RNPC3Q96LT9 517 aaKnown RBP13.32□□□□□ -0.28
RFX1-204ENST00000588885 JAKMIP1Q96N16 626 aaKnown RBP13.32□□□□□ -0.28
RFX1-204ENST00000588885 C22orf23Q9BZE7 217 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 HIPK3Q9H422 1215 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 STXBP5LQ9Y2K9 1186 aa13.32□□□□□ -0.28
RFX1-204ENST00000588885 LRRC37A2A6NM11 1700 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 DLL1O00548 723 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 KPNA6O60684 536 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 EIF5BO60841 1220 aaKnown RBP13.31□□□□□ -0.28
RFX1-204ENST00000588885 SMARCA1P28370 1054 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 KRT32Q14532 448 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 APOA5Q6Q788 366 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 HEATR3Q7Z4Q2 680 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 SGMS1Q86VZ5 419 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 TMEM199Q8N511 208 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 SAMD3Q8N6K7 520 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 CUL5Q93034 780 aa13.31□□□□□ -0.28
RFX1-204ENST00000588885 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms