RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 VSIG10LQ86VR7 867 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 TMEM199Q8N511 208 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 RNPC3Q96LT9 517 aaKnown RBP22.23■■□□□ 1.15
CCDC130-209ENST00000588809 PPP1R12CQ9BZL4 782 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 HIPK3Q9H422 1215 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 MTMR10Q9NXD2 777 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 DDX41Q9UJV9 622 aaKnown RBP22.23■■□□□ 1.15
CCDC130-209ENST00000588809 FRMPD4Q14CM0 1322 aa22.23■■□□□ 1.15
CCDC130-209ENST00000588809 RGS20O76081 388 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 CSF2RAP15509 400 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 LY6KQ17RY6 165 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 NFRKBQ6P4R8 1299 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 NFXL1Q6ZNB6 911 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 C16orf59Q7L2K0 433 aa22.22■■□□□ 1.15
CCDC130-209ENST00000588809 RRP36Q96EU6 259 aaKnown RBP22.22■■□□□ 1.15
CCDC130-209ENST00000588809 NOC4LQ9BVI4 516 aaKnown RBP22.22■■□□□ 1.15
CCDC130-209ENST00000588809 PLEKHA8P1O95397 391 aa22.21■■□□□ 1.15
CCDC130-209ENST00000588809 MMP3P08254 477 aa22.21■■□□□ 1.15
CCDC130-209ENST00000588809 CYP2C18P33260 490 aa22.21■■□□□ 1.15
CCDC130-209ENST00000588809 SRBD1Q8N5C6 995 aaKnown RBP22.21■■□□□ 1.15
CCDC130-209ENST00000588809 IL31RAQ8NI17 732 aa22.21■■□□□ 1.15
CCDC130-209ENST00000588809 AFG1LQ8WV93 481 aa22.21■■□□□ 1.15
CCDC130-209ENST00000588809 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.21■■□□□ 1.151e-23■■□□□ 14.1
CCDC130-209ENST00000588809 SUPT20HL2P0C7V6 817 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 EXOSC10Q01780 885 aaKnown RBP22.2■■□□□ 1.14
CCDC130-209ENST00000588809 PTPN11Q06124 597 aaPredicted RBP22.2■■□□□ 1.14
CCDC130-209ENST00000588809 NBPF20Q3BBV1 942 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 RASIP1Q5U651 963 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 KCNV1Q6PIU1 500 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 NEK1Q96PY6 1258 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 LRRC2Q9BYS8 371 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 TRMT13Q9NUP7 481 aaKnown RBP22.2■■□□□ 1.14
CCDC130-209ENST00000588809 SLC12A7Q9Y666 1083 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 MRVI1Q9Y6F6 885 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 UMODL1Q5DID0 1318 aa22.2■■□□□ 1.14
CCDC130-209ENST00000588809 TET1Q8NFU7 2136 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 MYO9BQ13459 2157 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 PIK3CDO00329 1044 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 RXRAP19793 462 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 TMEM240Q5SV17 173 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 PSRC1Q6PGN9 363 aaPredicted RBP22.19■■□□□ 1.14
CCDC130-209ENST00000588809 RASEFQ8IZ41 740 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 FANCBQ8NB91 859 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 WNT8AQ9H1J5 351 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 IL23AQ9NPF7 189 aa22.19■■□□□ 1.14
CCDC130-209ENST00000588809 SEC63Q9UGP8 760 aaKnown RBP22.19■■□□□ 1.14
CCDC130-209ENST00000588809 TGFB3P10600 412 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 MYCLP12524 364 aaPredicted RBP22.18■■□□□ 1.14
CCDC130-209ENST00000588809 HOXD8P13378 290 aaPredicted RBP22.18■■□□□ 1.14
CCDC130-209ENST00000588809 CCND2P30279 289 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 LAMC2Q13753 1193 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 KRT32Q14532 448 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 TMTC3Q6ZXV5 915 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 DHX32Q7L7V1 743 aaKnown RBP22.18■■□□□ 1.14
CCDC130-209ENST00000588809 FCHSD1Q86WN1 690 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 PPTC7Q8NI37 304 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 PIBF1Q8WXW3 757 aa22.18■■□□□ 1.14
CCDC130-209ENST00000588809 STAM2O75886 525 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 DGKDQ16760 1214 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 ADCK5Q3MIX3 580 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 ZNF697Q5TEC3 545 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 APOA5Q6Q788 366 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 SESTD1Q86VW0 696 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 KCNB2Q92953 911 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 STXBP5LQ9Y2K9 1186 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 KAT6AQ92794 2004 aa22.17■■□□□ 1.14
CCDC130-209ENST00000588809 MEIS2O14770 477 aa22.16■■□□□ 1.14
CCDC130-209ENST00000588809 CASTP20810 708 aaKnown RBP22.16■■□□□ 1.14
CCDC130-209ENST00000588809 MYSM1Q5VVJ2 828 aa22.16■■□□□ 1.14
CCDC130-209ENST00000588809 MICU3Q86XE3 530 aa22.16■■□□□ 1.14
CCDC130-209ENST00000588809 CMTR1Q8N1G2 835 aaKnown RBP22.16■■□□□ 1.14
CCDC130-209ENST00000588809 KAT2BQ92831 832 aa22.16■■□□□ 1.14
CCDC130-209ENST00000588809 TMEM265A0A087WTH1 108 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 F2P00734 622 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 CYP2C9P11712 490 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 UBA1P22314 1058 aaKnown RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 MRPS9P82933 396 aaKnown RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 SP2Q02086 613 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 FAM47CQ5HY64 1035 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 CELF3Q5SZQ8 465 aaKnown RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 ZNF365Q70YC5 407 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 DHX37Q8IY37 1157 aaKnown RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 VWCEQ96DN2 955 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 GUCD1Q96NT3 240 aa22.15■■□□□ 1.14
CCDC130-209ENST00000588809 INPP4AQ96PE3 977 aaPredicted RBP22.15■■□□□ 1.14
CCDC130-209ENST00000588809 PITPNM1O00562 1244 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 HMGB1P09429 215 aaKnown RBP22.14■■□□□ 1.13
CCDC130-209ENST00000588809 ACRP10323 421 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 ICAM3P32942 547 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 CCL23P55773 120 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 RAB11FIP4Q86YS3 637 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 HERVK_113Q902F9 699 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 RBM28Q9NW13 759 aaKnown RBP22.14■■□□□ 1.13
CCDC130-209ENST00000588809 PTPRSQ13332 1948 aa22.14■■□□□ 1.13
CCDC130-209ENST00000588809 CNTNAP5Q8WYK1 1306 aa22.13■■□□□ 1.13
CCDC130-209ENST00000588809 PPFIA4O75335 1185 aa22.13■■□□□ 1.13
CCDC130-209ENST00000588809 GGPS1O95749 300 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms