RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CCND2P30279 289 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 PPIGQ13427 754 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 12.2
DDX39A-208ENST00000588692 LY6KQ17RY6 165 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 ADCK5Q3MIX3 580 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 C9orf50Q5SZB4 431 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 FCHSD1Q86WN1 690 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 TMEM199Q8N511 208 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 KCNB2Q92953 911 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 CUL5Q93034 780 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 EMID1Q96A84 441 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-208ENST00000588692 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-208ENST00000588692 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
DDX39A-208ENST00000588692 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 B4GALT4O60513 344 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 STAM2O75886 525 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 MMP3P08254 477 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 SUPT20HL2P0C7V6 817 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 HSPA4P34932 840 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 RCAN1P53805 252 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 NFRKBQ6P4R8 1299 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
DDX39A-208ENST00000588692 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 EPB41L2O43491 1005 aaKnown RBP16.66■□□□□ 0.26
DDX39A-208ENST00000588692 RGS20O76081 388 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 TGFB3P10600 412 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 EPHB4P54760 987 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 PTPN11Q06124 597 aaPredicted RBP16.66■□□□□ 0.26
DDX39A-208ENST00000588692 LAMC2Q13753 1193 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 IL31RAQ8NI17 732 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 SMARCC2Q8TAQ2 1214 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 AFG1LQ8WV93 481 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 PPP1R12CQ9BZL4 782 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 TRPV6Q9H1D0 765 aa16.66■□□□□ 0.26
DDX39A-208ENST00000588692 ZBTB43O43298 467 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 CASTP20810 708 aaKnown RBP16.65■□□□□ 0.26
DDX39A-208ENST00000588692 DGKDQ16760 1214 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 NBPF20Q3BBV1 942 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 GNPTABQ3T906 1256 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 RAB11FIP4Q86YS3 637 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 DHX37Q8IY37 1157 aaKnown RBP16.65■□□□□ 0.26
DDX39A-208ENST00000588692 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
DDX39A-208ENST00000588692 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
DDX39A-208ENST00000588692 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
DDX39A-208ENST00000588692 PPP4R2Q9NY27 417 aa16.65■□□□□ 0.26
DDX39A-208ENST00000588692 LAMA2P24043 3122 aaKnown RBP16.64■□□□□ 0.25
DDX39A-208ENST00000588692 FGD1P98174 961 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 RTN1Q16799 776 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 FAM47CQ5HY64 1035 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 FAM109BQ6ICB4 259 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-208ENST00000588692 XRRA1Q6P2D8 792 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 PSRC1Q6PGN9 363 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-208ENST00000588692 TEX2Q8IWB9 1127 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
DDX39A-208ENST00000588692 KLF18A0A0U1RQI7 1052 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 MEIS2O14770 477 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 CSF2RAP15509 400 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 CYP2C18P33260 490 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 SMAD3P84022 425 aaKnown RBP16.63■□□□□ 0.25
DDX39A-208ENST00000588692 USP17L6PQ6QN14 398 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 DEFB123Q8N688 67 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 JAKMIP1Q96N16 626 aaKnown RBP16.63■□□□□ 0.25
DDX39A-208ENST00000588692 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-208ENST00000588692 KATNAL1Q9BW62 490 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 PSTPIP2Q9H939 334 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 TRMT13Q9NUP7 481 aaKnown RBP16.63■□□□□ 0.25
DDX39A-208ENST00000588692 SNX14Q9Y5W7 946 aa16.63■□□□□ 0.25
DDX39A-208ENST00000588692 TANC1Q9C0D5 1861 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 GOLGA8BA8MQT2 603 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 HOXD8P13378 290 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-208ENST00000588692 UBA1P22314 1058 aaKnown RBP16.62■□□□□ 0.25
DDX39A-208ENST00000588692 PSMA5P28066 241 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 CELF3Q5SZQ8 465 aaKnown RBP16.62■□□□□ 0.25
DDX39A-208ENST00000588692 MYSM1Q5VVJ2 828 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 SESTD1Q86VW0 696 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-208ENST00000588692 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.251e-9■■□□□ 11.7
DDX39A-208ENST00000588692 IL23AQ9NPF7 189 aa16.62■□□□□ 0.25
DDX39A-208ENST00000588692 FIBPO43427 364 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 GGPS1O95749 300 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 ICAM3P32942 547 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 MRPS9P82933 396 aaKnown RBP16.61■□□□□ 0.25
DDX39A-208ENST00000588692 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 HEATR3Q7Z4Q2 680 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 FBXL16Q8N461 479 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 KAT2BQ92831 832 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 SPATA33Q96N06 139 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 UMODL1Q5DID0 1318 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
DDX39A-208ENST00000588692 PPFIA4O75335 1185 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms