RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 BROXQ5VW32 411 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 C16orf59Q7L2K0 433 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 FBXO41Q8TF61 875 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 EVI5LQ96CN4 794 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 LRGUKQ96M69 825 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 DUSP23Q9BVJ7 150 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 SLC12A9Q9BXP2 914 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 HDAC8Q9BY41 377 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 CATSPERZQ9NTU4 200 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 GPATCH2Q9NW75 528 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 USP25Q9UHP3 1055 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 ZNF652Q9Y2D9 606 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 PCDHA2Q9Y5H9 948 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 MRFAP1Q9Y605 127 aa9.8□□□□□ -0.84
VMP1-208ENST00000588617 FAM47E-STBD1D6RA91 191 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 IFRD1O00458 451 aaPredicted RBP9.79□□□□□ -0.84
VMP1-208ENST00000588617 LEFTY1O75610 366 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 VAV1P15498 845 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 GTF2H3Q13889 308 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 ODF1Q14990 250 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 ARHGAP29Q52LW3 1261 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 C10orf62Q5T681 223 aaPredicted RBP9.79□□□□□ -0.84
VMP1-208ENST00000588617 EEF1DP3Q658K8 133 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 IL31Q6EBC2 164 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 RCSD1Q6JBY9 416 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 SEZ6L2Q6UXD5 910 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 ZNF655Q8N720 491 aaPredicted RBP9.79□□□□□ -0.84
VMP1-208ENST00000588617 EFHBQ8N7U6 833 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 SCYL1Q96KG9 808 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 SARGQ9BW04 601 aa9.79□□□□□ -0.84
VMP1-208ENST00000588617 WNT9AO14904 365 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 KRT37O76014 449 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 GSTM1P09488 218 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 PAMP19021 973 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 BMP8BP34820 402 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 SCAND1P57086 179 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 PICALMQ13492 652 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
VMP1-208ENST00000588617 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
VMP1-208ENST00000588617 PJA1Q8NG27 643 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 GIMAP7Q8NHV1 300 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 HSPBAP1Q96EW2 488 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 TCTN2Q96GX1 697 aa9.78□□□□□ -0.84
VMP1-208ENST00000588617 NPHP3-ACAD11A0A0J9YXS1 232 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 XPOTO43592 962 aaKnown RBP9.77□□□□□ -0.85
VMP1-208ENST00000588617 IL33O95760 270 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 LPOP22079 712 aaPredicted RBP9.77□□□□□ -0.85
VMP1-208ENST00000588617 NEK3P51956 506 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 CRY1Q16526 586 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 PRRT3Q5FWE3 981 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 CHAMP1Q96JM3 812 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 MMP19Q99542 508 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 ANLNQ9NQW6 1124 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 C1GALT1Q9NS00 363 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 PPARGC1AQ9UBK2 798 aaKnown RBP9.77□□□□□ -0.85
VMP1-208ENST00000588617 USP21Q9UK80 565 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 CBLCQ9ULV8 474 aa9.77□□□□□ -0.85
VMP1-208ENST00000588617 FAM95CA0A1B0GW59 222 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 H7C1D1 291 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 TGM5O43548 720 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 VCAM1P19320 739 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 PAX3P23760 479 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 GRK2P25098 689 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 GRK3P35626 688 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 LRRC32Q14392 662 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 GRM3Q14832 879 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 NFKBIBQ15653 356 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 GRIK4Q16099 956 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 INF2Q27J81 1249 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 CREB3L3Q68CJ9 461 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.76□□□□□ -0.85
VMP1-208ENST00000588617 AMOTL1Q8IY63 956 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 CMTR2Q8IYT2 770 aaKnown RBP9.76□□□□□ -0.85
VMP1-208ENST00000588617 FAM46AQ96IP4 442 aaKnown RBP9.76□□□□□ -0.85
VMP1-208ENST00000588617 UBL7Q96S82 380 aaPredicted RBP9.76□□□□□ -0.85
VMP1-208ENST00000588617 KCNJ15Q99712 375 aa9.76□□□□□ -0.85
VMP1-208ENST00000588617 TRBV23OR9-2A0A075B6M9 112 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 GOLGA8AA7E2F4 631 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 GOLGA8BA8MQT2 603 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
VMP1-208ENST00000588617 ERC2O15083 957 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 MYO1BO43795 1136 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 PCDHGA12O60330 932 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 FAM87AP0C7U9 286 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 BMP3P12645 472 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.85
VMP1-208ENST00000588617 MAP4P27816 1152 aaKnown RBP9.75□□□□□ -0.85
VMP1-208ENST00000588617 KRT85P78386 507 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 TNK2Q07912 1038 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 MORC3Q14149 939 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 GBX1Q14549 363 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 CLUL1Q15846 466 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 COBLL1Q53SF7 1204 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 EFCAB2Q5VUJ9 269 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 CMIPQ8IY22 773 aa9.75□□□□□ -0.85
VMP1-208ENST00000588617 PIWIL2Q8TC59 973 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms