RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 PTGER2P43116 358 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 PAK1Q13153 545 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 TFDP1Q14186 410 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 NTRK3Q16288 839 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 TCERG1LQ5VWI1 586 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 PRAMEF18Q5VWM3 479 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 USP17L6PQ6QN14 398 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 BTNL9Q6UXG8 535 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 ZBTB8OSQ8IWT0 167 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 HACE1Q8IYU2 909 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 PLIN2Q99541 437 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 MKRN1Q9UHC7 482 aaKnown RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 HOXC6P09630 235 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 PRELPP51888 382 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 UBASH3AP57075 661 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 XKR9Q5GH70 373 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 ZFPM1Q8IX07 1006 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 MYCT1Q8N699 235 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 DRC1Q96MC2 740 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 RIT2Q99578 217 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 GLIS2Q9BZE0 524 aaPredicted RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 IMPG2Q9BZV3 1241 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 DNAJC25Q9H1X3 360 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 CCDC169A6NNP5 214 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 GADD45BO75293 160 aaPredicted RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 KIF4AO95239 1232 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 RESP18Q5W5W9 173 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 MAP1SQ66K74 1059 aaPredicted RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 RSPH3Q86UC2 560 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 OPTNQ96CV9 577 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 TIPINQ9BVW5 301 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 SENP2Q9HC62 589 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 STRNO43815 780 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 EPHA7Q15375 998 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 NOM1Q5C9Z4 860 aaKnown RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 NOL9Q5SY16 702 aaKnown RBP8.32□□□□□ -1.08
ZNF554-202ENST00000588534 ATG4CQ96DT6 458 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
ZNF554-202ENST00000588534 ADM5C9JUS6 153 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MUTP22033 750 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 NDUFA8P51970 172 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 SEPT14Q6ZU15 432 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MYOCDQ8IZQ8 938 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 AOPEPQ8N6M6 819 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 DEPTORQ8TB45 409 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 CCSER1Q9C0I3 900 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 TRPC6Q9Y210 931 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 ANKRD36CQ5JPF3 1778 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 KIF2AO00139 706 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 TRAF5O00463 557 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 TNPO2O14787 897 aaKnown RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 P4HBP07237 508 aaKnown RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 LIG1P18858 919 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 PPP2R3AQ06190 1150 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MKRN3Q13064 507 aaKnown RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 SPECC1Q5M775 1068 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 CCDC112Q8NEF3 446 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MCPH1Q8NEM0 835 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 DNERQ8NFT8 737 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 GPRASP2Q96D09 838 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 L3MBTL3Q96JM7 780 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 CLIC6Q96NY7 704 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 NBPF3Q9H094 633 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MRPL44Q9H9J2 332 aaKnown RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 TUFT1Q9NNX1 390 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 DISC1Q9NRI5 854 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 AGTPBP1Q9UPW5 1226 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 MYH15Q9Y2K3 1946 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 ZSCAN12O43309 604 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 GNAT1P11488 350 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 SCP2P22307 547 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 SNAP25P60880 206 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 BAATQ14032 418 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 TRIM14Q14142 442 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 FAM26FQ5R3K3 315 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 OXER1Q8TDS5 423 aa8.31□□□□□ -1.08
ZNF554-202ENST00000588534 DHTKD1Q96HY7 919 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 ZHX1Q9UKY1 873 aaPredicted RBP8.31□□□□□ -1.08
ZNF554-202ENST00000588534 COL2A1P02458 1487 aaPredicted RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 MYH14Q7Z406 1995 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 IPO5O00410 1097 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SOCS7O14512 581 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NR1I2O75469 434 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 RPN1P04843 607 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NR3C2P08235 984 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 POLGP54098 1239 aaPredicted RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NAP1L1P55209 391 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 DMP1Q13316 513 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms