RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 KAT2BQ92831 832 aa17.23■□□□□ 0.35
LRFN3-203ENST00000587257 KATNAL1Q9BW62 490 aa17.23■□□□□ 0.35
LRFN3-203ENST00000587257 GTF2IRD1Q9UHL9 959 aa17.23■□□□□ 0.35
LRFN3-203ENST00000587257 FGRP09769 529 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 ZNF543Q08ER8 600 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 DGKDQ16760 1214 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 TCTN1Q2MV58 587 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 USH1GQ495M9 461 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 RRP12Q5JTH9 1297 aaKnown RBP17.22■□□□□ 0.35
LRFN3-203ENST00000587257 SEPT14Q6ZU15 432 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 CHST3Q7LGC8 479 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 MUC6Q6W4X9 2439 aa17.22■□□□□ 0.35
LRFN3-203ENST00000587257 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 PTK7Q13308 1070 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 PTPROQ16827 1216 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 TIGD5Q53EQ6 642 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 VPS53Q5VIR6 699 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
LRFN3-203ENST00000587257 C17orf80Q9BSJ5 609 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 TCP11L1Q9NUJ3 509 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 HDAC6Q9UBN7 1215 aa17.21■□□□□ 0.35
LRFN3-203ENST00000587257 LGR5O75473 907 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 F2P00734 622 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 AMHP03971 560 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 PSEN2P49810 448 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 MRE11P49959 708 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
LRFN3-203ENST00000587257 RCAN3Q9UKA8 241 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 EMSYQ7Z589 1322 aa17.2■□□□□ 0.34
LRFN3-203ENST00000587257 DCXO43602 365 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 SNHG28P0DPA3 235 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 MFSD10Q14728 455 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 STXBP2Q15833 593 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 ZNF618Q5T7W0 954 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 TRAF7Q6Q0C0 670 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 TET1Q8NFU7 2136 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 NEK9Q8TD19 979 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 EMID1Q96A84 441 aaPredicted RBP17.19■□□□□ 0.34
LRFN3-203ENST00000587257 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 MAF1Q9H063 256 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
LRFN3-203ENST00000587257 PTPRSQ13332 1948 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 H3BQ06 376 aaPredicted RBP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 ZNF286BP0CG31 522 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 MX1P20591 662 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 MBTPS1Q14703 1052 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 ALX1Q15699 326 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 KIAA0753Q2KHM9 967 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 TRIM71Q2Q1W2 868 aaKnown RBP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 GPATCH4Q5T3I0 446 aaKnown RBP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 MYOCDQ8IZQ8 938 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 PPTC7Q8NI37 304 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 SYTL5Q8TDW5 730 aaPredicted RBP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
LRFN3-203ENST00000587257 TTC14Q96N46 770 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 SAMD11Q96NU1 681 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 KCNH6Q9H252 994 aa17.18■□□□□ 0.34
LRFN3-203ENST00000587257 HTRA4P83105 476 aaPredicted RBP17.17■□□□□ 0.34
LRFN3-203ENST00000587257 NHLH1Q02575 133 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 LAMC2Q13753 1193 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 EPC2Q52LR7 807 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 MCF2L2Q86YR7 1114 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 DHX37Q8IY37 1157 aaKnown RBP17.17■□□□□ 0.34
LRFN3-203ENST00000587257 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
LRFN3-203ENST00000587257 WNT8BQ93098 351 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 TAAR1Q96RJ0 339 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 RMDN3Q96TC7 470 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 DDX41Q9UJV9 622 aaKnown RBP17.17■□□□□ 0.34
LRFN3-203ENST00000587257 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 ABCB11O95342 1321 aa17.17■□□□□ 0.34
LRFN3-203ENST00000587257 HAS3O00219 553 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 FGAP02671 866 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 ZP2Q05996 745 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
LRFN3-203ENST00000587257 CDC37Q16543 378 aaPredicted RBP17.16■□□□□ 0.34
LRFN3-203ENST00000587257 DBF4BQ8NFT6 615 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
LRFN3-203ENST00000587257 YME1L1Q96TA2 773 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 PRKAG3Q9UGI9 489 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 BRWD1Q9NSI6 2320 aa17.16■□□□□ 0.34
LRFN3-203ENST00000587257 SIP14410 1827 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 EIF3JO75822 258 aaKnown RBP17.15■□□□□ 0.34
LRFN3-203ENST00000587257 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 PCP11498 1178 aaKnown RBP17.15■□□□□ 0.34
LRFN3-203ENST00000587257 THPOP40225 353 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 ZNF200P98182 395 aaPredicted RBP17.15■□□□□ 0.34
LRFN3-203ENST00000587257 ARHGEF16Q5VV41 709 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 EP400NLQ6ZTU2 488 aa17.15■□□□□ 0.34
LRFN3-203ENST00000587257 FBXL18Q96ME1 805 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms