RNA–Protein interactions for RNA: ENST00000586457.1

CLIP3-203, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 1 (best)

Gene CLIP3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-203ENST00000586457 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 OPLAHO14841 1288 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 TGFB3P10600 412 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 ADD1P35611 737 aaKnown RBP12.5□□□□□ -0.41
CLIP3-203ENST00000586457 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
CLIP3-203ENST00000586457 GHRHRQ02643 423 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
CLIP3-203ENST00000586457 SNX17Q15036 470 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 SLC35G1Q2M3R5 365 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 FAM47CQ5HY64 1035 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 CCSAPQ6IQ19 270 aaPredicted RBP12.5□□□□□ -0.41
CLIP3-203ENST00000586457 XRRA1Q6P2D8 792 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
CLIP3-203ENST00000586457 RTEL1Q9NZ71 1219 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 NOD1Q9Y239 953 aa12.5□□□□□ -0.41
CLIP3-203ENST00000586457 A0A1W2PPC1 479 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 SMCO2A6NFE2 343 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 PIK3CDO00329 1044 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 NOP56O00567 594 aaKnown RBP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 SUPT20HL2P0C7V6 817 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 BMP8BP34820 402 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 ADCY7P51828 1080 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 NKX3-2P78367 333 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 ANKRD1Q15327 319 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 DGKDQ16760 1214 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 TMEM63BQ5T3F8 832 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 COPS5Q92905 334 aa12.49□□□□□ -0.41
CLIP3-203ENST00000586457 GPKOWQ92917 476 aaPredicted RBP eCLIP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 DDX41Q9UJV9 622 aaKnown RBP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
CLIP3-203ENST00000586457 A6NJR5 290 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 FOSP01100 380 aaPredicted RBP12.48□□□□□ -0.41
CLIP3-203ENST00000586457 CDC27P30260 824 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 ZNF76P36508 570 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 ANAPC15P60006 121 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 PSMC6P62333 389 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
CLIP3-203ENST00000586457 NEDD9Q14511 834 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 GIMAP8Q8ND71 665 aaPredicted RBP12.48□□□□□ -0.41
CLIP3-203ENST00000586457 AFG1LQ8WV93 481 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 BADQ92934 168 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 ZFP91Q96JP5 570 aaPredicted RBP12.48□□□□□ -0.41
CLIP3-203ENST00000586457 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 SPATA33Q96N06 139 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 SLC26A6Q9BXS9 759 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 C6orf50Q9HD87 102 aa12.48□□□□□ -0.41
CLIP3-203ENST00000586457 MEIS2O14770 477 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 CTAGE5O15320 804 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 FIBPO43427 364 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 SORBS3O60504 671 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 CDKL5O76039 1030 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 GGPS1O95749 300 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 SCG2P13521 617 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PTGS1P23219 599 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 GNA11P29992 359 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PDIA3P30101 505 aaKnown RBP12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PURAQ00577 322 aaKnown RBP12.47□□□□□ -0.41
CLIP3-203ENST00000586457 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 STK3Q13188 491 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 UBE2SQ16763 222 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PCNX4Q63HM2 1172 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 MCTP2Q6DN12 878 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 TMEM199Q8N511 208 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 BICD2Q8TD16 824 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 ZNF274Q96GC6 653 aaPredicted RBP12.47□□□□□ -0.41
CLIP3-203ENST00000586457 GDF15Q99988 308 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 RIC8AQ9NPQ8 531 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PDLIM7Q9NR12 457 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PCDHA6Q9UN73 950 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 PCDHA8Q9Y5H6 950 aa12.47□□□□□ -0.41
CLIP3-203ENST00000586457 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 KIAA0355O15063 1070 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
CLIP3-203ENST00000586457 PPFIA4O75335 1185 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 ARIH2O95376 493 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 TIMP1P01033 207 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 CDK7P50613 346 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 FPGSQ05932 587 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 PFKFB3Q16875 520 aaPredicted RBP12.46□□□□□ -0.41
CLIP3-203ENST00000586457 CELF3Q5SZQ8 465 aaKnown RBP12.46□□□□□ -0.41
CLIP3-203ENST00000586457 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 TDHQ8IZJ6 230 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 C7orf31Q8N865 590 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 PHKBQ93100 1093 aa12.46□□□□□ -0.41
CLIP3-203ENST00000586457 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms