RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 DIS3Q9Y2L1 958 aaKnown RBP14.4□□□□□ -0.1
VMP1-202ENST00000585847 FRMPD4Q14CM0 1322 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 RPTORQ8N122 1335 aa14.4□□□□□ -0.1
VMP1-202ENST00000585847 FIBPO43427 364 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 TRAK2O60296 914 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 HOXD10P28358 340 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 ALDH5A1P51649 535 aaPredicted RBP14.39□□□□□ -0.11
VMP1-202ENST00000585847 ADCY7P51828 1080 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 MRPL12P52815 198 aaKnown RBP14.39□□□□□ -0.11
VMP1-202ENST00000585847 PRMT2P55345 433 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 TRIM32Q13049 653 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 DPP9Q86TI2 863 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 BLIDQ8IZY5 108 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 IL31RAQ8NI17 732 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 OXER1Q8TDS5 423 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 MORC4Q8TE76 937 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 CUL5Q93034 780 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 TNFRSF25Q93038 417 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 PGBD1Q96JS3 809 aa14.39□□□□□ -0.11
VMP1-202ENST00000585847 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.39□□□□□ -0.11
VMP1-202ENST00000585847 A0A1W2PQ27 194 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 A0A1W2PQ64 194 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 A0A1W2PQD8 194 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 LAD1O00515 517 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 PPP6R2O75170 966 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 PRPF40AO75400 957 aaKnown RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 ELNP15502 786 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 EDNRBP24530 442 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 FOXD4L5Q5VV16 416 aaPredicted RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 ANO1Q5XXA6 986 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 OLFML2BQ68BL8 750 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 REXO1Q8N1G1 1221 aaKnown RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 FOXD4L4Q8WXT5 416 aaPredicted RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 PXMP2Q9NR77 195 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
VMP1-202ENST00000585847 PCDHA6Q9UN73 950 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 PCDHA8Q9Y5H6 950 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 KIAA1217Q5T5P2 1943 aa14.38□□□□□ -0.11
VMP1-202ENST00000585847 LETM1O95202 739 aaPredicted RBP14.37□□□□□ -0.11
VMP1-202ENST00000585847 SNAI1O95863 264 aaPredicted RBP14.37□□□□□ -0.11
VMP1-202ENST00000585847 FOSP01100 380 aaPredicted RBP14.37□□□□□ -0.11
VMP1-202ENST00000585847 AP3B2Q13367 1082 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 STK38Q15208 465 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 SF3A1Q15459 793 aaKnown RBP14.37□□□□□ -0.11
VMP1-202ENST00000585847 EARS2Q5JPH6 523 aaKnown RBP14.37□□□□□ -0.11
VMP1-202ENST00000585847 JAKMIP3Q5VZ66 844 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 DNERQ8NFT8 737 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 PXYLP1Q8TE99 480 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 SH3TC2Q8TF17 1288 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 CRYGNQ8WXF5 182 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 PDCD2LQ9BRP1 358 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 CNPY2Q9Y2B0 182 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 BRCA2P51587 3418 aa14.37□□□□□ -0.11
VMP1-202ENST00000585847 CCDC194A0A1B0GVG4 234 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 FAM205CA6NFA0 338 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 BTBD18B2RXH4 712 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 ADCY3O60266 1144 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 EIF2AK2P19525 551 aaKnown RBP14.36□□□□□ -0.11
VMP1-202ENST00000585847 FXR1P51114 621 aaKnown RBP eCLIP14.36□□□□□ -0.11
VMP1-202ENST00000585847 UBXN2AP68543 259 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 NR5A1Q13285 461 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 SLC39A14Q15043 492 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 PGM5Q15124 567 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 LINC00301Q8NCQ3 95 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 TRPV1Q8NER1 839 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 RAET1EQ8TD07 263 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 RMDN3Q96TC7 470 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 PYM1Q9BRP8 204 aaKnown RBP14.36□□□□□ -0.11
VMP1-202ENST00000585847 TINF2Q9BSI4 451 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 ANO3Q9BYT9 981 aa14.36□□□□□ -0.11
VMP1-202ENST00000585847 COLQQ9Y215 455 aaPredicted RBP14.36□□□□□ -0.11
VMP1-202ENST00000585847 KIF28PB7ZC32 967 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 SPTLC2O15270 562 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 CYP2C19P33261 490 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 MRPS9P82933 396 aaKnown RBP14.35□□□□□ -0.11
VMP1-202ENST00000585847 NBR1Q14596 966 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 PRAMEF19Q5SWL8 479 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 MAP3K21Q5TCX8 1036 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 ARMCX2Q7L311 632 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 FERMT2Q96AC1 680 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 CCDC34Q96HJ3 373 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
VMP1-202ENST00000585847 USP28Q96RU2 1077 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.35□□□□□ -0.11
VMP1-202ENST00000585847 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 SYNGAP1Q96PV0 1343 aa14.35□□□□□ -0.11
VMP1-202ENST00000585847 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 RGS20O76081 388 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 NR3C2P08235 984 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 ZNF865P0CJ78 1059 aaPredicted RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 GCFC2P16383 781 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms