RNA–Protein interactions for RNA: ENST00000585672.5

MBD1-212, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-212ENST00000585672 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 FAM205CA6NFA0 338 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 BUB1O43683 1085 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 EEF1GP26641 437 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 FLT3P36888 993 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 KIF11P52732 1056 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 RNASE9P60153 205 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 SEPT2Q15019 361 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 CCDC38Q502W7 563 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 DDX42Q86XP3 938 aaKnown RBP eCLIP16.36■□□□□ 0.21
MBD1-212ENST00000585672 UBLCP1Q8WVY7 318 aaPredicted RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 LRRC45Q96CN5 670 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 NLRP3Q96P20 1036 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 MTFR1LQ9H019 292 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 CNOT10Q9H9A5 744 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 EXOC1Q9NV70 894 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 IQSEC3Q9UPP2 1182 aaPredicted RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 LRRC42Q9Y546 428 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 DIP2BQ9P265 1576 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 MSH2P43246 934 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 LBRQ14739 615 aaKnown RBP16.36■□□□□ 0.21
MBD1-212ENST00000585672 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 KLHL7Q8IXQ5 586 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 RETREG2Q8NC44 543 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.36■□□□□ 0.21
MBD1-212ENST00000585672 LPIN2Q92539 896 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 ANKRD27Q96NW4 1050 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 NEO1Q92859 1461 aa16.36■□□□□ 0.21
MBD1-212ENST00000585672 MYH10P35580 1976 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 PLEKHG3A1L390 1219 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 PDHA1P08559 390 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 VIMP08670 466 aaKnown RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 CACNA2D4Q7Z3S7 1137 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 ANKRD23Q86SG2 305 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 TBC1D10CQ8IV04 446 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 UBAC1Q9BSL1 405 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 ABCC12Q96J65 1359 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 ABLIM1O14639 778 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 LCA5LO95447 670 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 ECEL1O95672 775 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 MMEP08473 750 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 CHN1P15882 459 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 KRT71Q3SY84 523 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 ATXN2LQ8WWM7 1075 aaKnown RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 TLCD1Q96CP7 247 aa16.35■□□□□ 0.21
MBD1-212ENST00000585672 PCMTD1Q96MG8 357 aaPredicted RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 UBE2OQ9C0C9 1292 aaKnown RBP16.35■□□□□ 0.21
MBD1-212ENST00000585672 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 HOXC9P31274 260 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 SGSM1Q2NKQ1 1148 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 GALNTL6Q49A17 601 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 RNF220Q5VTB9 566 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 GPIHBP1Q8IV16 184 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 APLFQ8IW19 511 aaPredicted RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 KLHL29Q96CT2 875 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 PUS7LQ9H0K6 701 aaKnown RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 THAP9Q9H5L6 903 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 ARHGEF3Q9NR81 526 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 SAMD15Q9P1V8 674 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 NKX1-2Q9UD57 310 aaPredicted RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 BLOC1S6Q9UL45 172 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 ZMYND8Q9ULU4 1186 aaPredicted RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 TRIM75PA6NK02 468 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 SHBGP04278 402 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 GNAZP19086 355 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 GNAQP50148 359 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 SCNN1BP51168 640 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 PDXDC2PQ6P474 469 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 C2CD5Q86YS7 1000 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 EIF1ADQ8N9N8 165 aaKnown RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 WASF1Q92558 559 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 BICD1Q96G01 975 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 FAM163AQ96GL9 167 aaPredicted RBP16.34■□□□□ 0.21
MBD1-212ENST00000585672 MYD88Q99836 296 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 TUBGCP2Q9BSJ2 902 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 TSKSQ9UJT2 592 aa16.34■□□□□ 0.21
MBD1-212ENST00000585672 GRID2IPA4D2P6 1211 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 WNT7AO00755 349 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 RPN1P04843 607 aaKnown RBP16.33■□□□□ 0.2
MBD1-212ENST00000585672 SETSIPP0DME0 302 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 MAGEA1P43355 309 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 POLE2P56282 527 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 ATP11AP98196 1134 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 CADPS2Q86UW7 1296 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 ADSSL1Q8N142 457 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
MBD1-212ENST00000585672 NOX5Q96PH1 765 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 B4E1Z4 1266 aa16.33■□□□□ 0.2
MBD1-212ENST00000585672 PJA2O43164 708 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms